Corynebacterium urealyticum DSM 7109: cu0504
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Entry
cu0504 CDS
T00685
Name
(GenBank) putative ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cur
Corynebacterium urealyticum DSM 7109
Pathway
cur03420
Nucleotide excision repair
cur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
cu0504
03430 Mismatch repair
cu0504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cur03400
]
cu0504
Enzymes [BR:
cur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
cu0504
DNA repair and recombination proteins [BR:
cur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
cu0504
MMR (mismatch excision repair)
Other MMR factors
cu0504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
CAQ04464
UniProt:
B1VFC5
LinkDB
All DBs
Position
607460..611119
Genome browser
AA seq
1219 aa
AA seq
DB search
MSPQQPRSESTHNAQHPTPHSAQQRKAAMQEPAGGIISPEELATRWLKQPYPPTPQQSAV
ISAPPQGSYIVVAGAGAGKTETMAARVVWLVANGYVLPEHVLGLTFTRKAANELGQRIRG
RLETLARSGFREQLPADDPRHEALRNISPAVSTYDSYAGNIVGEYGLLAPVEPSGRIISD
AEKWMITRQLLLDHDREMQTSRSMVTVIDFIHRLSDEMDNHLAELKDVRGETEALIDTIQ
QVEHGVGKPLSKAAYKLRDANQERLDLLPWVKKYWERLQELDVRTFGQQMTLAAKLASEH
AIVGQSQRERFRVVMLDEYQDTSHAQRVLLRSLFGDGQDDELAVTAVGDPMQAIYGFRGA
TSSNLGNFETDFPFRGEPAQKFELTTSWRNPASVLELANVVSSRTLGENRTVSELKPRAG
AEDGEIQVAFFDEEDQELEWLTDQLQQRWESFKKRKEAAAVSGEKVDPFSAAVLVRKNKE
ALPIFELLRAKGVPVELTGGAGLLDIPEVADVYATLRALVDPEDDPAMLRLLTGPRFNLG
ARDLQILARRAQQLQRRAKGDTDPGEVNQDTTSAGGEDPWIHNPAYEELKSLESPLREQL
LEAIPNPADATVGLADAIADFADAEEQGMSPRGARAIAELSRELGHLRRNCLTKPLPDLI
ADIEDMIGIRTEVLTRWHRNPDDSIGTSHLDEFADIVQSFSQLGGSNASILVDYLRAAHE
HDSGLEPGEVEAKTDTVQILTVHRSKGLEWDIVAVPYAHRKNFFDAETPGVRLEEWLHKA
ERIPSSLRGDAENEGQPGGYPLYDASHAEKSADLTKAADAFEVQLQAKEAQESERLFYVG
ITRTERVLLVSGSAYSSGVTAVDPSLNLVLLRNRITDSRAPLAGASVHTWSDLGRKPSKS
DAARVEKGNATEIDHYFYPTPEQLIAREDYALERRRAEADGEQASWPQPAPLASRPGAAD
GAGMVIDAIGAATTGDSATESAASQDMLTRQWDEETRLLIQEHQQRTLTAVEVPLDPMLT
ATQAVAMNQDPEQFARRRRRPIPMQPQPYAKRGTAFHNWVEQHYNQAMLFDEDEMPGASD
ATLQDPQLEELKNKFLGSEWAQRTPESVEGSYLVNIGGFVFNGRMDAVFHEGEDPAAGWL
VVDWKTGQMPTGRDMKNAELQLAAYRLAWAKILSRQLGVEVPVDNVRTAFFYVRTQHTHY
VQDLPNEEELIARLGLNKS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcagcagccacgctccgagagcacacacaacgcccagcacccgaccccgcac
agcgcacagcagcgaaaggcagcaatgcaggaaccagccggcggaatcatcagccccgag
gaactcgccacccggtggctcaaacaaccctacccacctaccccgcaacagtcggcagtc
atcagcgcgccaccgcagggcagttacatcgtcgtcgctggtgccggcgccggcaagacc
gaaacgatggccgcgcgcgtggtctggctcgtcgccaacggctacgtcctgcccgaacac
gtcctgggcctgaccttcacccgcaaggccgccaacgagcttggccagcgtatccggggc
cggctggaaacgctggcccgcagtggcttccgcgagcagctgccagccgacgacccgcgc
cacgaagcgctgcgcaacatctcgcccgcggtctccacctacgactcctacgccggcaac
atcgtcggggagtacgggttgcttgcccccgtggaacccagcgggcggatcatcagcgac
gccgaaaaatggatgatcacccgtcagctgctccttgatcacgaccgcgagatgcaaacc
tcacgctcgatggtcaccgtgatcgatttcatccacaggctctccgatgagatggataac
cacctcgcagaacttaaggacgtccgtggcgaaaccgaagcgctgatcgataccatccag
caggtcgaacacggcgtgggcaagccgctttccaaggccgcctacaagctccgcgacgcc
aaccaggagcgcctcgacctgctgccctgggttaagaagtactgggaacgcctccaggaa
ctcgatgtgcgcaccttcggccagcaaatgaccctcgccgccaagctcgcctccgagcat
gcgatcgtcggccagtcccagcgcgaacgcttccgcgtggtcatgttggacgagtaccag
gacacctcgcacgctcagcgcgtgctgctgcgctcccttttcggggatgggcaggacgac
gaactcgccgtcaccgccgtgggcgaccccatgcaggcgatctatggcttccgcggggcg
acctcctccaacctcgggaacttcgaaaccgacttccctttccgcggggaacccgcccaa
aagttcgagctaaccacctcttggcgtaaccctgcctccgtgttggaactcgcaaacgtc
gtctcctcccgcactctgggtgagaaccgcaccgtctccgagctgaagccccgcgcggga
gccgaggatggagaaatccaggtggccttcttcgacgaagaggaccaggaactcgaatgg
ctcaccgaccagctgcaacagcgctgggagagcttcaagaagcgcaaggaggccgccgcc
gtatcgggggagaaggttgaccccttcagtgcggccgtgctcgtgcggaagaacaaagaa
gccttaccgatcttcgagctcctgcgcgccaagggcgtgccggtggaactcactggtggg
gcggggttgctggacatccccgaggtcgcggatgtctacgccaccctgcgcgccctcgtc
gacccggaggatgaccccgcgatgctccgcttgctcaccggcccgcgcttcaacctcggg
gctcgggacctgcagatcctcgcccgccgcgctcagcagctccagcgccgcgccaagggg
gacaccgacccaggagaggtcaatcaggacacgaccagcgccgggggagaggacccgtgg
atccacaatcccgcctacgaggagctgaagagcctcgaatccccgctacgtgagcaactc
ctcgaagcgatccccaaccccgcggacgccaccgttggtttggccgacgccatcgcggac
ttcgcggatgccgaagagcaagggatgagcccgcggggtgcgcgagccatcgccgaactc
tcccgcgagctcggccacctgcgccgcaactgcctcaccaagccactgccggacctcatc
gcggacatcgaggacatgatcggcatccgcaccgaggtgctcacccgctggcaccgcaac
ccggatgactcgatcggcaccagccacctcgacgagttcgcggacatcgtccagagcttc
tcccagctcggtggctccaacgcgtcgatcctggtggattacctgcgcgctgcccacgag
cacgactccggcctggaacccggcgaggtcgaggcgaaaaccgataccgtccagatcctc
accgtccaccgctccaaggggctggagtgggacatcgttgccgtaccttatgcgcaccgc
aagaacttcttcgacgccgaaaccccaggcgtcaggcttgaagaatggcttcataaggcc
gagcgcatcccctccagtctgcgcggcgacgctgagaacgaaggccaaccgggcggctac
ccgctctatgacgctagccacgccgagaagagcgcggacctcaccaaggctgctgatgct
ttcgaagttcagctgcaagccaaggaggcccaggagagcgagaggctgttctacgtggga
atcacccgcaccgaacgtgtgctgctggtgagtggctccgcgtatagttccggcgttacc
gccgtggacccctcgctgaacctggtgctgctgcgcaaccgcatcaccgattcccgtgcg
cccctggcaggggcgagtgtgcacacctggtccgacctggggcgcaagccaagtaagtca
gatgccgcgagggtggagaagggcaacgccaccgagatcgaccactacttctatcccacg
ccagagcagctcatcgcgcgcgaggactatgcgcttgagcgtcgccgtgccgaagccgac
ggcgagcaggccagctggccgcagcccgcgccactggccagcagacctggtgctgccgac
ggagcgggcatggtcattgacgcgatcggcgcggcaaccaccggtgactccgccactgaa
tctgccgccagccaggacatgctgacccgccaatgggacgaggaaacccgcctgctgatc
caagagcaccagcagcgcaccctcaccgccgtggaggtcccactcgacccgatgctcacc
gcaacccaagcggtcgcgatgaaccaggacccggaacagttcgcacggcggcgtcgtcgc
cccatcccgatgcagccccagccctacgccaagcgcggaacggccttccacaactgggtg
gagcagcactacaaccaagccatgctcttcgacgaggacgaaatgcctggcgcctccgac
gccaccctccaggacccgcagctcgaggaattgaaaaacaagttccttggctccgagtgg
gcgcagcgcaccccggagtcggttgagggctcctacctggttaacatcggcggattcgtc
ttcaacggccggatggatgccgtcttccacgaaggcgaggaccccgccgcgggatggctc
gtcgtcgactggaagactgggcagatgccgaccggccgggatatgaagaatgccgagctc
cagctggccgcctaccggctggcctgggcgaaaatcctgagccgccagctgggtgtggag
gtgccggtggataacgtgcgcaccgcgttcttctatgtgcgcacccagcacacccactac
gtgcaagacttgccgaacgaagaagaactcatcgcccggctaggcttgaacaagtcctaa
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integrated database retrieval system
