KEGG   Corynebacterium ureicelerivorans: CUREI_04560Help
Entry
CUREI_04560       CDS       T03241                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
cuv  Corynebacterium ureicelerivorans
Brite
KEGG Orthology (KO) [BR:cuv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CUREI_04560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cuv03400]
    CUREI_04560
Enzymes [BR:cuv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CUREI_04560
DNA repair and recombination proteins [BR:cuv03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CUREI_04560
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: AIL96661
UniProt: A0A077HJK5
LinkDB All DBs
Position
867392..869668
Genome map
AA seq 758 aa AA seqDB search
MANDQKVRVGGRELTVSNLDKVLYPATGTTKADVMRYYQAVAEVLIPQARRRPVTRKRWP
EGVEKQSFFRKDLEDSAPEWIATGTIQHTTSVNAYPLIDGSATLAWLAQVAALELHTPQW
RFGEDGAPRNPDRLVLDLDPGPGVELRDTAEVALWCREILEDMGLTCVPVTSGSKGIHLY
AGLDGASEADAVSKVAKTLAQHLERTHPDRVTADMSKARRKGKVFLDWSQNNGKKTTICP
YSLRGRQQPTVAAPRTWDEIEDPKLRQLEFEEVMERVTDGLDPMADLGTHRDDKLATYRS
MRDKRKTGEPVPDAAPQPREGEPIFVIGEHDASHLHWDFRLEHDGVLVSWAVPKGPPLET
DKNRLAVQTEDHPIEYAEFEGTIPKGQYGAGTVKIWDIGTCEVEKWRANEIIVVLHGRGD
GGLGGIPRRYALIRTEGKNWLLKLMRDQPLPARPLAPMLPTMATRGDITLDQHEGATFAF
EMKWDGYRILADVGRDVRLVSRGGKDYTRLFPHASELSQMLADGGCVDGELVALGPDGRP
DFSLLHNADRDGAHAHLRYMVFDLLRLGGRDLTAEPWSTRRELLGHMGDTEHVVVPPAYT
GSFDHAWRAAEELGLEGVVAKRTDSAYAPGERSSAWLKVKRALHQEVVVVGVRTGKRDIA
SLLVAVPDDEGELRYAGRVGTGFSNAQLADIGAKLRRIQRATPPVDVPAEDARDAWWVIP
EYVAEVQLAGATAEKKVRQASWRGWRDEKDPSEVRWEV
NT seq 2277 nt NT seq  +upstreamnt  +downstreamnt
atggcgaacgaccagaaggtccgcgtcggcggccgcgagctcaccgtgagtaacctcgat
aaggtgctttacccggccacgggcacgaccaaggccgacgtgatgcggtactaccaggcc
gtcgccgaggtgctcatcccacaggcgaggcggcggccggtgaccaggaagcggtggccc
gaaggcgtcgagaagcaaagcttcttccgcaaagacctcgaagattccgcgcccgagtgg
atagccaccggcaccatccagcacaccacgagcgtcaacgcgtacccgcttatcgacggc
tccgccaccctcgcctggctggcccaagttgccgccctcgagctgcacaccccgcagtgg
cgcttcggcgaggacggggcaccccgcaacccggaccggctggtgctggacttagacccc
gggcccggcgtggagctgcgtgacaccgccgaggtggccctgtggtgccgcgagatcctc
gaggacatggggctgacctgcgtcccggtgacgtccgggtccaagggcatccacctctac
gcgggcctagacggggcaagcgaagcggacgccgtgtccaaggtggccaagacgctggcg
cagcatctcgagcgcacccacccagaccgggtgaccgccgacatgtcgaaggcgcggcgc
aaaggaaaggtctttttggactggagccaaaacaacgggaagaagaccaccatctgcccg
tactcgctgcgggggcggcagcagcccaccgtcgccgcgccgcggacgtgggacgaaatt
gaagacccgaagctgcgccagctcgagttcgaggaggtcatggaacgggtcacagatggg
ctcgatccgatggcggaccttggcacccaccgggacgacaagctggccacgtaccgctcc
atgcgcgacaagcgcaagaccggcgagccggtgccggacgccgcgccgcagccacgcgag
ggcgaacccatcttcgtcatcggcgagcacgacgcctcgcacctgcactgggatttccgg
ctggagcacgacggcgtgctcgtctcctgggccgtaccgaagggcccgccgctcgagacc
gacaagaaccgcctcgccgtgcagaccgaggaccacccgattgagtacgccgaattcgaa
ggcaccatcccaaagggccagtacggcgccggcacggtgaaaatctgggacatcggcacg
tgcgaggttgaaaagtggcgcgcaaacgagatcatcgtcgtactgcacggccgcggcgac
gggggcttgggcggcatcccgcgccgctacgcgctcattcgcaccgagggaaagaactgg
ctgctcaagctcatgcgcgaccagcctttgcccgcgcgcccgcttgctcccatgcttccc
accatggccacccgcggcgacatcacgctcgaccaacacgagggcgccacgttcgcgttc
gagatgaagtgggacggctaccggatcctcgcggacgtcggccgcgacgtccgtttagtc
agccgcggcggcaaggactacacccgcctcttcccgcacgcgagcgagctttcgcagatg
cttgccgacggcggctgcgtcgacggcgagttggtcgccctcgggcccgacggacgtccc
gacttttcgctgctgcacaacgccgaccgcgacggcgcgcacgcgcacctgcggtacatg
gtcttcgatctcctccgcctggggggccgcgacctgaccgcggagccgtggtccacccgg
cgcgagttgctgggccacatgggcgacaccgagcacgtggttgtcccacccgcgtacacc
ggcagcttcgaccacgcgtggcgcgccgccgaagagctggggctggagggagtggtggcc
aaacgcaccgactcggcgtacgcgccgggggagcgcagcagcgcgtggttgaaggttaaa
cgggcactgcaccaagaggtggtggttgtcggcgtgcgcacgggcaagcgcgacatcgca
tccctgctcgtcgcggtgccggacgacgaaggcgagctgcgctacgccggccgcgtgggt
acgggcttttccaacgcgcagctcgccgacattggggcgaagctgcgccgcattcagcgc
gcgacaccaccggtggacgtgcctgccgaggatgcgcgcgatgcttggtgggttataccg
gagtacgtggcggaagtgcagctcgcaggggccaccgcggagaaaaaagtgcgccaggcc
tcgtggcgaggctggcgcgatgagaaagatcccagcgaggtgcgttgggaggtctag

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