Campylobacter upsaliensis: CUP3940_0159
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Entry
CUP3940_0159 CDS
T06758
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III (exonuclease III)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cux
Campylobacter upsaliensis
Pathway
cux03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CUP3940_0159 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cux03400
]
CUP3940_0159 (xth)
Enzymes [BR:
cux01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CUP3940_0159 (xth)
DNA repair and recombination proteins [BR:
cux03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CUP3940_0159 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Glyco_hydro_66
Motif
Other DBs
NCBI-ProteinID:
QKF87146
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All DBs
Position
157605..158363
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AA seq
252 aa
AA seq
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MKLLSWNINGLRAICDKGGLEWLREEKIDFIGFQEIKASEDKFPKKIYEFPFKHMYFNSA
KRAGYSGVMSLCNFESETKKCEFFDDDEGRVLEHRFNNIVLFNIYFPNGQKDEIRLNHKM
KFYADFLVYLNKLLKEGKEVIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLA
LGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKSKLKNAFIKDDIFG
SDHAPVGIELDI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattatcgtggaatattaacggtttaagggcgatttgtgataaaggcggcttg
gagtggctaagagaagaaaaaattgattttataggctttcaagaaattaaggcgagtgag
gataaatttcctaaaaaaatttacgaatttccttttaagcatatgtattttaattctgct
aaaagggcgggctattctggcgtgatgagtctttgtaattttgaaagcgaaacgaaaaaa
tgcgaattttttgacgatgatgaggggagggttttagaacatcgctttaataatatcgtg
ctttttaatatttattttcctaatgggcaaaaagacgaaattcgtttaaatcacaagatg
aaattttatgcggattttttagtctatttaaataagcttttaaaagagggtaaagaagtc
atcatctgcggcgatgtcaatacagctcataaagaaatagacctaacccatcctaaagca
aatgcgaatacttcaggctttttgcctattgaaagggcgtggattgatgatttattagca
cttggtttcatcgatacttttagagaaatcaatggggatattaaggaaaaatactcgtgg
tggtcttatagaatgaaggctagagaaagaaatgtgggctggaggattgattatttcttc
atctcaaagggactaaaatctaaacttaaaaatgccttcatcaaagatgacatttttggc
tcagaccacgctccagtagggatagagctggacatttaa
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