Corynebacterium variabile: CVAR_2573
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Entry
CVAR_2573 CDS
T01594
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
cva
Corynebacterium variabile
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CVAR_2573 (hrpB)
Enzymes [BR:
cva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CVAR_2573 (hrpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_22
AAA_19
AAA_16
AAA_25
nSTAND3
AAA_30
AAA_11
DUF6245
ResIII
HA2_N
PhoH
ParA
DUF6380
Motif
Other DBs
NCBI-ProteinID:
AEK37916
UniProt:
G0HG38
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All DBs
Position
2903000..2905555
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AA seq
851 aa
AA seq
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MTPASVTSPARTTPPERPGPKTRHPSASATDPPTLVGMVDLPFAAGRRDLTDALASRGCA
VVQAPPGTGKTTLAPQYVLDHVRGAGLDGRVIVTQPRRVAARSSASRIAELRGTRLGDEI
GYTVRGDRKVSAHTAIEMVTPGVLLRRLLNDPDLDGVAAVVIDEIHERHLESDLVFGMLA
QLRELHDDLILVAMSATLDAARFTTLLGGEEGPAPLVDVPSPIHPLDIRYASSSESMVNR
DRRNRSAVEDLVTATVRRALAETGSGDVLAFVPTIRGTEMVAAVLSRDGVPAQALHGRLS
TAEQAGIVTGHSDATRRVIVATDVAESSLTVPGVRVVVDACLSRVSRRDTTRGMSVLVTE
TASQASMTQRAGRAGREGPGTVYRCLTAEQYAKAPAASPPAVLTSDLTAALLDVACWGSP
RGTDLPLPDPFPTPAADAAEDALRGIGAVDASGEATGEGRRLARIPTDPRLARGGLEATQ
RVDAATVAKVLAVLDGGVGSPDDLPRNLPSAKDPVVSRFRRILQDATSSTSGKSHPDLRG
SDAVAYTLACAFPGLIAHRVASSGNRYLTVSGTGAVWRDSAASSEWIAVADIAGASTRST
DGTGAVIRAAVPLSGDLAFDAAAPLLRDGVTCTWTPGGPAGKLSARRVRGLGAVELASSP
VSVKDVSAPDREDAVRAGLASHGLGVLEWSKNADELRRRIQYLHEQGEEGYPDVADAGHA
DRLLEFVVPDLVAGKRPDLAGLLRGLIPWNHPIDDAAPTSLELPAGRTVHLRYPEVGTGG
PVVVATKLQDCFGLQASPEVAGRRIQFQLLSPAQRPLAVTDDLASFWAGPYLQVRSEMRG
RYPKHPWPENP
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgcgagcgttacctctccagcccggacgacgccgccggaaaggcccgggccg
aagacgaggcatccgtcagcgtccgcgactgatccacctaccctggtgggcatggttgac
ctccccttcgccgccggacgccgcgacctcaccgacgccctggcgtcccgcggctgtgca
gtggtccaggccccacccggtaccggtaagacgacgctggccccgcagtatgtgctggac
catgtgcgcggtgccgggctggacgggagggtcatcgtcacccagccccggcgcgtcgcc
gcccggtcctcggcctcacgcatcgccgagctgcggggaacccggctcggcgacgagatc
ggttacaccgtccgcggcgaccggaaggtctccgcacataccgccatcgagatggtgacg
ccgggtgtactgctgcggcgcctgctcaatgacccggatctggacggggtcgccgccgtg
gtcatcgatgagatccatgagcggcatctcgaatccgacctggtcttcggcatgctcgcc
cagctgcgggagctgcatgacgatctcattctcgtggccatgtccgccaccctcgacgcc
gcccgcttcaccacgctgctcggcggggaagaaggcccggcaccgttggtggatgtcccc
tcgcccatccatccactggatatccggtacgcctcctcgtcggagtccatggtcaaccgc
gaccgccggaaccgttcagccgtggaggacctggtcaccgccaccgtgcgccgcgcactg
gcggagacgggctccggtgacgtgctcgccttcgtaccgaccatccgcggcaccgagatg
gtcgccgcagtgctgtccagggacggggtacccgcccaggccctgcacggtcggctgagc
accgctgaacaggcggggattgtcaccggacacagtgacgcaacccgccgcgtcatcgtc
gccaccgacgtcgccgagtcctctttgaccgtgcccggggtgcgcgtggtggtggacgcc
tgcctgtcccgggtctcccggcgcgacaccacccgcggcatgtccgtgctggtcaccgag
accgcgtcccaggcctcgatgacccagcgtgccggtcgcgccgggcgtgaaggcccgggt
accgtgtaccgctgcctcaccgccgagcagtacgccaaggctccggccgcatccccgccg
gcggtgctgaccagtgacctcaccgccgcgctgctcgatgtggcgtgctggggttcaccc
cgtggcaccgacctgccgctgcccgaccccttccccacccctgccgccgatgccgccgaa
gacgccctgcgcggcatcggtgcggtggacgcctccggcgaggccaccggggaaggacgc
cgcctcgcacgtatccccaccgacccccggctggcgcgcggcgggctggaggcgacacaa
cgggtggacgccgccacggtcgccaaagtcctcgccgtcctcgacggcggtgtcggctca
cccgacgacctgccccgtaacctgccgtcggcgaaggatccggtggtgtcccgcttccgg
cggatccttcaggacgcgacctcatccacctcaggaaaaagccaccccgatctccgcggc
tccgacgcggtggcctacaccctggcctgcgccttccccgggctgatcgcccaccgggtc
gcgtcctccggcaaccggtatctcacggtctccgggacaggtgcagtgtggcgggacagt
gccgcgagctcggaatggatcgccgtggcggacatcgccggggcatccacccggtccacc
gacggcaccggcgcggtgatccgtgctgcggtgcccctgtccggggacctggccttcgac
gccgccgccccactgctacgcgacggcgtgacctgcacctggacaccaggtggcccggcc
gggaagctcagtgcgcgccgggtgcggggtctcggcgcggtggagctggcgtcctccccg
gtatcggtgaaggacgtcagcgcgccagatcgtgaggacgcggtgcgcgccggactggcg
tcccacggactgggcgtcctcgaatggtcgaagaacgccgacgagctgcgacgacgcatc
cagtacctgcacgagcagggtgaggagggttacccggatgtcgctgacgcggggcacgcc
gaccggctgctggagttcgtcgtgcctgacctggtggccgggaagcgtcctgatctggcg
gggctgctgcgcggactgatcccgtggaaccacccgatcgacgatgccgcgccgacgtcc
ctggagcttccggcgggacgcaccgtgcacctgcggtatccggaggtcggcaccggcggt
ccggtggtggtggcgacgaagctgcaggactgtttcggactgcaggcgtcccccgaggtc
gccgggcgacggatccagttccagctgctctccccggcgcagcgtcccctcgccgtcacc
gatgacctggcgagtttctgggccgggccctacctgcaggtccgctcggagatgcgcggg
cggtatccgaagcacccctggccggagaatccgtga
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