Cyprinodon variegatus (sheepshead minnow): 107080671
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Entry
107080671 CDS
T06110
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107080671
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107080671
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107080671
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107080671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_hinge
zf-ribbon_3
zinc_ribbon_2
Motif
Other DBs
NCBI-GeneID:
107080671
NCBI-ProteinID:
XP_015224365
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
PCPDEPARLKAILPKNTMKLGETLDETIELELVDQYDNVTKRLTAAAAKSMTVEAEGLDQ
SNIQFLWQSDGIKVKSFLQTVSAGQESSSSVAVTGVCFKSGPLGPRELCFSYNNYTECVI
IKVAAGIPAKLKLLSGPELPLQVLNCQGIPTPFTVQLCDKWENPSQDKNLTIEITTTSET
LKLTHESQPMDSEGKVCFTINNLKGSKGSYVLELKGSLNGKSIPGPSVKLILLADPNKPM
NLSVKYDTNARFPAGDFSVTVLSEEGSQIQTFKPADLSMSLWEKGSATQPETDIMPKCGK
PIKDEENHCYRFRGKAIPKHAGEYTVEFALQSNKTEDQLRTQINIKVVANEPIKLEPECQ
LETPAVFNCRDISNRILVENVTLKIMDQHGNPAGQDLNGKVFISMKCPDGEIPRSLPLFK
DKNSHVQISLKEGTANIDSLAISENSPGENGRRYILLFRPEVTMPPTSLSPFELPFYFYN
DAENHQKRCELLKRKDRLNEVKDTTEKEISFRNGLKHKGLKIEHQLSIKDIAEHLKQKNV
EVENIEKSIRRVCSIPNQFSGPDILGMVGHLAFVADDDAARVISWHLQGDMDCVITTTTP
AAQKLHQKTKGNQQVMPLDSILLHQGSRPLPHIKYGRELFRPTGNPVFAKDLLIYPYKES
CDPDKLTKVFKNLLGDTILMDDLNSATNYRKEVVEKGIFCPTILTRKGDRVSGRGKFGGK
NNRAPSIDQLKVFGAPLPPHYYTLKDQIDALREYQALVEKKEEAEKELNDHKNPYQ
NT seq
2332 nt
NT seq
+upstream
nt +downstream
nt
gccttgtccagatgaaccagcgcgactaaaggcaattctacctaaaaacacaatgaagct
tggtgaaacacttgatgaaaccatagagttggagcttgtggaccagtatgacaatgtcac
caagaggctgactgctgccgctgccaagtcaatgactgttgaagctgagggactggacca
gtctaacattcaattcctatggcagagcgacggcattaaggtgaagtccttcctgcagac
tgtctctgcgggacaagagagcagcagttctgttgcggttaccggagtctgtttcaagtc
agggcctcttgggcccagggagctttgcttcagctacaacaactacacagaatgcgtcat
cataaaagtggcagcaggaatccccgccaagcttaagctccttagtgggcctgagctgcc
attgcaggtattgaattgtcaaggtattccaacaccatttactgtccagctctgtgataa
gtgggaaaatccttctcaggacaaaaacttaactattgagataacaacaacatccgagac
actgaagctgacacatgagtcacaacccatggactcagaaggaaaagtctgcttcaccat
taataatcttaaaggttcaaaagggtcctacgtgctggagcttaaaggatccttaaatgg
caaatccatccctggtccatcagtgaaactcattctactcgctgatcccaacaaacctat
gaacctgtcagtgaaatacgatacaaatgccagattccctgctggagatttttcagtgac
tgtgctttctgaagaggggagtcagatacaaacttttaaacctgcagatctatctatgtc
cctgtgggagaaagggtcggcaacacaacctgaaacagacattatgccaaaatgcggaaa
acctattaaagatgaggagaatcactgttatcgatttagaggaaaagcaatcccaaaaca
tgctggggagtatactgtagagtttgctctacaaagcaacaaaacagaggatcagcttag
gactcagatcaatataaaggtggtggctaatgaaccaatcaaactggaacccgaatgcca
gctagaaactccagctgttttcaactgtagagacatcagcaatcgaatcttggttgaaaa
tgtgacgctaaagattatggatcagcatggtaatccagctgggcaggacttgaacggtaa
ggtgttcatctcaatgaagtgtcctgacggagaaatacccagaagtctccccttgtttaa
agacaaaaacagccatgtccaaattagcttaaaagaaggaactgccaacattgatagttt
agcaatttcagaaaacagtcctggtgagaacggaagaagatatattctcctcttcaggcc
tgaggtgacgatgccgcccacatctctcagtccttttgagctgcccttctatttttacaa
tgatgctgagaaccaccaaaaaagatgtgaactgctgaagagaaaggatcggctgaatga
ggtcaaagacacaacagagaaagagatttctttcagaaatgggctgaaacacaaaggcct
aaaaatagaacaccagttatcgattaaagacattgcagaacatctaaaacagaagaacgt
agaggttgaaaacatagagaaaagcatcagaagagtttgttccattcctaaccaattcag
tgggccggatattcttggaatggttggccacttggcttttgttgctgatgatgatgctgc
aagggttatctcctggcacctgcagggagacatggactgcgtcatcaccaccacaacacc
agcagctcagaaactccaccaaaaaacaaagggcaaccagcaggtcatgcctctcgacag
cattcttttgcaccaaggaagccgacccctgccacacataaaatatggcagagaactttt
cagacctactgggaacccagtctttgccaaggacctgctgatttatccttacaaagagag
ttgtgatccagataaactgacaaaagtgtttaaaaacctcctcggcgacacgatcctgat
ggacgacttgaactcagccactaactacaggaaagaggttgtggagaaggggatattttg
tcctaccatactgacccgaaagggagacagggtcagtggcaggggcaaattcggagggaa
aaacaacagagcaccatcaattgaccagttaaaagtgtttggagctcctctaccaccaca
ctactacacactgaaagatcaaatagatgcgcttcgtgagtaccaagcactagtggagaa
aaaggaagaagcagaaaaggagcttaatgaccacaagaatccgtatcagtga
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