Cyprinodon variegatus (sheepshead minnow): 107087195
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Entry
107087195 CDS
T06110
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
cvg04137
Mitophagy - animal
cvg04144
Endocytosis
cvg04340
Hedgehog signaling pathway
cvg04350
TGF-beta signaling pathway
cvg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107087195
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107087195
04350 TGF-beta signaling pathway
107087195
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107087195
04137 Mitophagy - animal
107087195
09144 Cellular community - eukaryotes
04520 Adherens junction
107087195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107087195
04121 Ubiquitin system [BR:
cvg04121
]
107087195
03029 Mitochondrial biogenesis [BR:
cvg03029
]
107087195
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107087195
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107087195
Autophagy
Mitophagy
Other mitophagy associated proteins
107087195
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
HECT type E3
107087195
Mitochondrial biogenesis [BR:
cvg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107087195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
107087195
NCBI-ProteinID:
XP_015234113
Ensembl:
ENSCVAG00000003665
UniProt:
A0A3Q2FFW4
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MSNPGNRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGQVVECRELLENEGPVFEGCFSEEPLPYSDPTGA
AGGWHCRLESPVQEGRLQSQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHNIISHQSQVKETSQPPPMDVGVDEGGGGGVSSGGEGEVAVRYERDLVHKLKLLRHE
LSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWL
YLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHSHYING
SFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFSQH
ELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHKEL
ELIIGGLGKIDLADWKANTRLKHCSGESNVVRWFWQAVEAFSEERRGRLLQFVTGSTRVP
LQGFKALQGSTGSAGPRLFTIHLIDANTENLPKAHTCFNRIDIPPYESYEKLYEKLLTAV
EETCGFAVE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggaatcggagaaacgggtccagcatcaaaatccgactgacagtctta
tgtgccaagaacctagcaaagaaagacttctttcgcctaccggatccttttgctaaggtg
gtggtagacggatcaggtcaatgccactccacagacacagtaaagagcacactggacccc
aagtggaatcagcactatgacctctacatcggaaagacagactcaatcaccatcagcata
tggaaccacaagaagatccataaacgtcagggggcaggctttctgggctgcatacgactg
ctttctaatgccatcagcaggctaaaagatacaggataccagcgtctagatctatgcaag
ctgaacccctctgacagtgacgcagtgagggggcagattgtagtgagcttacagacgcgg
gaccggattggaagcggaggtcaagtagtggaatgccgagaactgttagaaaatgaaggg
cctgtttttgagggatgtttcagcgaagagccgctgccctattccgaccccaccggcgct
gctgggggctggcactgccggctggagtcaccagttcaggagggccgtctgcagagccag
cgaatcagggggcaggactccagaggtcatggccacacccctcagaaccgacctcatgga
catcaaccgcctgatttaccggagggatatgagcaacggacgactgtgcagggccaggtg
tacttccttcacacacagacaggggtcagcacctggcacgaccctcggataccacgggat
ctggccagtgtgagctgcgaggagctcggcccgctgccagtgggctgggaagtcaggagc
actgtgtccggccgcatctacttcgtggaccacaacaaccgaaccacgcagttcaccgac
ccacgcctgcacaacataatcagccaccaatcccaagtgaaggaaacatcccagccccca
cccatggatgtgggggtggatgaggggggaggcggaggggtgagcagcggaggagaggga
gaagtggcggtgcgctacgagcgagacctggtgcacaagttgaagctgctccgccatgag
ctatcgctgcagcagcctcaggcaggacactgtcgcatcgaggtctcccgagaggagatc
tttgaggagtcgtatcggcagataatgaagatgaggccaaaggacctgaagaaacggctg
atggtgaagttcagaggagaggagggcctcgattacggaggagtggccagggagtggctg
tacctgctgtgccatgaaatgttgaacccctactacggcctcttccagtactccactgac
aacatctacacactacagatcaaccctgactcctccatcaaccctgaccacctgtcctat
ttccactttgtgggccgtgtgatgggcctggctgtcttccacagccactacatcaacggc
agcttcacgctgcccttctacaagcagctgctgggcaaacccatccagctcaacgacctg
gagaccacggacccagagttgcacaagagcctcgtctggatactagagaacgacatcacc
tctgttctagatcacacattttgtgtggagcacaatgccttcgggaagttctcccaacat
gaactcaaaccaaacggcagaaatattcccgtcacagaggagaacaagaaggaatatgtt
agattatatgtgaactggcggttcatgcgtgggattgaagcccagtttctggcgctacaa
aaaggattcagtgagctgatcccacagcacctccttaaaccgtttgaccacaaggaacta
gagttaataatcggtggacttggaaagatcgacctggcagactggaaggccaacacccgc
ctgaagcactgcagcggtgaaagcaacgtggtgcggtggttctggcaggccgtggaggcc
ttcagcgaagagaggagagggcgcctcctgcagtttgtcacaggctccactcgggtgccc
ctacaagggttcaaagcgctgcagggctctacaggttctgcaggaccgaggctcttcacc
atccatttgatagacgccaacacagagaacctccccaaagctcacacatgttttaacagg
atagatatccctccctatgagtcttacgagaaactttacgagaaactgctgacagccgtg
gaggagacctgtggctttgccgtggagtga
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integrated database retrieval system
