Cyprinodon variegatus (sheepshead minnow): 107088969
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Entry
107088969 CDS
T06110
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
107088969
NCBI-ProteinID:
XP_015236935
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MSWKRNYFASGGGAAAGVQGLVTPRTMNSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIF
RRSFRQLTTHKCMEDSCIFCALKSIFAQFQFSSERVLPSDALRSALAKTFQDEQRFQLGI
MDDAAECFENLLMRIHFHISAESREDICTAKHCIPHQKFAMTLFEQCVCSSCGASSDPLP
FIQMVHYISTTSLCNQAVRMLECREKPTPDMFGELLRNASNMGDLRNCPSNCGEVLRIRR
VLMNSPEIVSIGLVWDSDHSDLAEDVIHSLGTCLRLGDLFYRVTEERARQAELYLVGMVC
YYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVSRCIKGHYQPLLLLYADPRGTPV
ILQESPNPCTGSNPQLELQHCSSKAGYDSEDSGREPSISSDTRTDSSTDSSSHRTSRSRP
LHQSTGSRLSSESQTTVVCSHDTPPLSADTGESAVDPPTRHPSPPLQEYKETAVFLLSSR
RPLTSSSSSSRPLSSSSSSGVGGCEGGAGGPHWEDESTSSESKSSSSGSRYRPTWRPRRE
ALNIDSIFTRQRDSSLGYSTAPGSSLLPEPQQSLPFVGPQSGLENTEGRETREAGFGLVG
QPRFSSAGRTMGPPVPPPLRGVEHQPRLIQRMESGYESSERNSSSPDREVGQQKRVLMSG
PSWRSVPKSKSSGAITQELPHPCWVGGCATGAGRSELDELQEEVARRARQQEQQKRKEAE
QEAAMGFNPRPSKFMDLDQLQHQAVLRPLHEANAHSGLAVAACMRSTGGPIKRRQEQEME
QDAGRAHPQGPRSEQPGSVQVLLTPNQEEEEDESTTSRHAAQGQSPPPPPPPYHPSLPRP
TLTLSISHPCSPSSQREEEEKRDEECEDGSEGMGVRLCELLQAGGVSVRPLGKHLAISLP
SLPLRLWDTHTSHSAHNPPPPCSPPPSTPPEYYGQRKHLTPLWQPPRPHSPDNRSPHWQQ
HAVLADGSTRHWSSWSLDRPDAVVTPYDTPPDRCFPIRPQNLGQSCSYSSQSSPGHYSSQ
HTPGQQGDVRCEREETELSELDSLYQASLQAGRTGCSPSERLISRMGVQTRSKTPSADME
RSAYGAHSTSSPTYLNKPVTLRVEPDDGENQRRIGRSLSGTVVTSRRSRLTATRSFELSG
GAGSFWLCLTGVKLSSDQSPALFH
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggaagaggaactattttgcctccggtggtggagcggctgccggggtgcagggg
ctggtcaccccgagaaccatgaactctattgcgcccagcaaaggcctgagcaatgaaccc
ggacaaaacagctgcttcctcaacagcgctctccaggttttgtggcatcttgacatcttc
aggagaagctttcgtcagctgaccactcacaagtgcatggaggactcatgtatcttctgt
gctctaaagagcatctttgctcagttccagttcagcagcgagcgtgttctgccgtcggac
gcactgcggagcgctctggccaagactttccaagacgaacagcggtttcagctgggcatc
atggacgacgctgctgaatgttttgagaatctgctgatgcgtatccacttccacatcagc
gcagagagcagggaggacatctgcacagccaaacactgcatccctcaccagaagtttgcc
atgactctttttgaacaatgtgtgtgcagcagctgtggagcctcatcggaccccctgccc
ttcattcagatggttcattacatctcaaccacgtctctctgtaaccaggcagtgagaatg
ctggagtgcagagagaaaccaacgccggacatgtttggagagctgctgcgcaatgccagc
aacatgggagaccttcgcaactgccctagtaactgtggggaggttctgcgtatccgacgg
gtgctgatgaactcaccagaaatagtgtccatcgggctggtgtgggactcggatcattct
gacctagcagaggacgtcatccacagcctgggaacatgcttgcgtctgggagatttgttt
taccgtgttacagaggaaagggctcgccaggcggagctctacttggtgggcatggtgtgc
tactacggcaagcactactccaccttcttcttccagaccaagatacgcaagtggatgtac
tttgacgacgcccacgtcaaagagatcggcccaaagtggaaggacgtagtgtctcgctgt
attaaaggccactaccagcccctgttgctgctctacgctgacccccgtgggacgccggtg
atactgcaggagagccccaacccgtgtactggctccaacccgcagctggagctccagcac
tgcagcagcaaagctggttacgacagtgaggactcaggtcgggagccatccatatccagc
gacactcgcaccgactcttcgacggacagctcgagccaccgtacgtcccgcagccgaccc
ttgcaccagtccacgggcagccggctctccagtgaatcccagactacagtggtctgtagc
cacgacacaccgccacttagtgctgacactggagagtcagcagtggatcctccaacccgc
cacccctctcctcccctgcaggagtacaaggagacggcagtcttcctcctgtcttcacgc
aggcccctcacctcctcctcctcgtcctcccgccccctctcgtcttcgtcttcgtctgga
gtcgggggctgcgagggcggggctgggggtccccactgggaggatgaaagcaccagcagt
gagagcaagtccagttcttctggaagccgttatcggccaacctggaggcccaggagggag
gctctgaacattgacagtatcttcacccgacaaagagactcctctctgggctacagcact
gcaccagggtcctctcttcttcctgagcctcagcagtccctcccctttgtgggaccacaa
tcaggactggaaaacacagagggaagggagaccagggaggccgggtttgggctggttggt
cagcccaggttttccagtgcagggcggactatgggtcctcctgttcctccacctctgaga
ggggtggagcaccagccacgtctgatccagagaatggagagtggctacgaaagcagtgag
aggaacagcagcagccctgacagggaggtggggcaacaaaaacgggtgctgatgtcagga
ccgtcatggcgatcggtgcccaagtcgaaaagcagtggtgctatcacacaggagctgcca
cacccctgctgggtaggcggctgtgccacaggcgctggccgcagtgagcttgatgagctg
caggaggaggtggcgaggagagcccgccagcaggagcagcaaaaacgcaaggaggctgag
caggaagcagccatgggattcaaccccagacccagcaagttcatggatctggaccagctg
caacaccaggctgtgctaagacccctgcatgaggctaacgctcatagtggattggctgta
gctgcgtgcatgaggagcactgggggcccaatcaaacgcaggcaggaacaggaaatggaa
caggacgcgggacgcgcccatccacaggggcctcgcagtgaacaacctggctcggtccaa
gtactgctgacgcccaatcaggaagaggaagaagacgagtcgacgaccagccgacacgct
gctcagggtcaaagcccacccccacctcctccaccttaccacccctctctccctcgacca
acgctcacccttagtattagtcacccctgcagcccgtccagtcaaagggaggaggaggag
aaacgagatgaggagtgtgaggatggaagcgaggggatgggggtgaggctatgtgagtta
ctgcaggctgggggtgtgagtgtcagacctctaggcaagcacttggccatctctctaccc
tcacttcctcttcgtctctgggatacacacacctcacactctgcgcacaacccgccaccg
ccctgttctcctcccccatcaacccctccagaatattacgggcaaaggaaacacctcacg
ccgctctggcagccgccacgaccacattctcccgataataggtctccccattggcaacag
cacgcagtccttgcagacggaagcacgcgtcactggtcctcttggagtctggaccgcccg
gatgctgtggtaacgccatatgacacgcccccggaccgctgctttcccatcagaccacag
aatcttggtcagagctgcagctacagttctcagtcttctccagggcactacagctcccag
catacccctgggcagcagggtgatgtccgctgtgaacgtgaagagactgagctgtctgag
ctggactccctttatcaggccagtctgcaggctgggagaacaggctgcagcccatctgag
aggctgatatccaggatgggagttcagacgcgctccaagacccccagcgcagacatggag
aggagcgcgtatggggcacacagcaccagcagccccacctacctcaacaagccagtgacg
ctgcgggtggagcctgatgatggggagaaccagaggcgaattggacgcagcctgagcggc
acggtggtgacctcccgccgcagccgcctcactgcaacccgcagctttgagctgtcgggt
ggtgctggaagtttctggctgtgtctgacaggagtcaagctgtcctcggaccagagccct
gctctgtttcactga
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integrated database retrieval system
