Cyprinodon variegatus (sheepshead minnow): 107092431
Help
Entry
107092431 CDS
T06110
Symbol
top3b
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03440
Homologous recombination
cvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107092431 (top3b)
03460 Fanconi anemia pathway
107092431 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvg03032
]
107092431 (top3b)
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107092431 (top3b)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
107092431 (top3b)
DNA replication proteins [BR:
cvg03032
]
Eukaryotic type
DNA Topoisomerases
107092431 (top3b)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
107092431 (top3b)
FA (Fanconi anemia) pathway
107092431 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
107092431
NCBI-ProteinID:
XP_015242407
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSKGSCSSRKGLNGACSVHEYSGSFQGQTVRFKMTSVCGH
VMSLDFTGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEARGCDCVVLWLDCDK
EGENICFEVLDAIQPVMNKGGGREQSVFRAKFSSITDTDIWNAMNRLGEPNKNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETF
WVIQAKTVWVPSSLVCCDHNNIRCWIVTDIMMMMMMMCFLXVQVESVSKKEKAKQRPQAL
NTVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLKQQVNNP
AWSEEVKALLSSGINRPRKGSDAGDHPPITPMRCASEGELGESYRLHERERGGTQLRGAK
EWFMFPGYTAVMPWQGIPLEEALPACERGDTFTVEEVKLVERQTSPPDYLTEAELITLME
KHGIGRRTEFYRRKPAGCSVGHCVPAAALKRSEFLCLQAKPSRLHCSHCDETYSLPQNGA
IKLYKELRCPLDDFELVLWTSGARGKSYPLCPYCFSHPPFRDMKKGMGCNECTHPSCQHS
LNSLGIGQCVECDSGVLVLDPTSGPKWRMACNKCNVVVHFFEHAHKVQVAQESCDACDAS
LVAVDFNKTRTPLPDGETQHTGCVFCDSVFQDLVELKHATMRHSMYRGGGSRRGGRGRGR
GRRGNPKKPKDKMAALAAYFV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgttctgatggtggcagagaaaccttctctggctcagtccatcgctaaaatc
ctctccaaaggaagctgctccagtcggaaaggcctgaacggagcgtgttcggtacatgag
tacagcggcagcttccagggccagacggtccgcttcaagatgacctcggtgtgtggtcac
gtgatgagcctggattttactggaaaatacaacaactgggacaaggtggacccggcagaa
ctgttcagtaaagctcccacagagaagaaggaggccaaccctaagctgaacatggtgaag
ttcctgcaggtggaggcccgaggctgcgactgtgtggttttatggttggactgtgacaaa
gaaggcgaaaacatctgtttcgaggttctggatgccatccagccggtcatgaataaaggc
ggcggcagagagcagagcgttttccgggccaagttcagctccataaccgacaccgacatc
tggaacgccatgaaccgcctgggggaacccaacaagaacgaggcgctgtcggtggacgcc
cgccaggagctggacctgcggatcggctgtgccttcacacggttccagaccaaatatttc
cagggcaaatatgggaacttggactcgtctctaatctcgtttggaccgtgtcagacccca
acgctcggattctgtgtggagcgccatgataagatccagtcctttaaaccggaaacattc
tgggtcatccaggcaaagacagtttgggtaccatcatctttagtctgttgtgaccataat
aatatccggtgttggattgtaactgatatcatgatgatgatgatgatgatgtgttttctg
nnggtgcaggtggagtctgtgagcaaaaaggagaaggccaaacagaggcctcaggccctg
aatactgtggagatgctgagagtggccagctctgctttaggtatgggtccccagcacacc
atgcagatcgcagagcgcctttacacccagggctacatcagctaccctcggactgagacc
acccactaccccgagaactttgacctgaaggggaccctgaagcagcaggtcaacaatcca
gcgtggtcggaggaggtgaaagcgcttctgtcatccggtataaaccgtcccaggaagggc
agcgacgcaggagaccatcctcccatcactcccatgcgttgtgcgtcagagggggagctg
ggtgagtcatacaggctgcatgaaagggaaagaggcgggacccagctcaggggcgctaag
gagtggtttatgttcccaggttacacagcggtgatgccctggcaggggatcccgctggaa
gaagctctgcctgcctgtgagcgtggagacacttttacagtggaggaggtgaagctggtg
gagcggcagacgagtcctcctgactacctgacagaggcagaactcatcacgctcatggag
aaacacggcatcggtaggagaaccgagttctacaggagaaaacccgcaggttgttctgtg
ggtcattgtgtcccagctgcagctcttaaacgaagcgagttcctctgtctgcaggccaag
ccgagccgactccactgctcccactgcgatgagacctacagcctgccccagaacggagcc
atcaagctgtacaaggagctccgctgtccgctggacgactttgagctggtgctgtggacg
tctggcgcccgagggaagagctacccgctgtgtccctactgcttcagccacccccccttc
agggacatgaagaaaggtatgggatgcaatgaatgcacccatccctcctgccagcattcc
ctcaactctctgggcatcggccagtgcgtggagtgcgacagcggggttctggtgctggat
cccacctctgggcccaaatggagaatggcctgcaacaagtgcaacgtggtggtgcacttc
tttgaacacgcacacaaagtacaggtcgctcaagagagctgtgacgcttgcgacgcctcc
ctcgtcgctgtggacttcaacaagacccgcaccccacttcctgacggcgagactcaacac
accggctgcgttttctgtgactccgtcttccaggacttggtggagctcaaacacgccacc
atgaggcactccatgtatcgaggcgggggatccagacgcggaggccggggaagaggaagg
ggacgtcgtggcaaccctaagaaacccaaagataaaatggcagccctggcagcgtacttt
gtgtag
DBGET
integrated database retrieval system
