Cyprinodon variegatus (sheepshead minnow): 107093343
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Entry
107093343 CDS
T06110
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107093343 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107093343 (usp4)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107093343 (usp4)
Peptidases and inhibitors [BR:
cvg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107093343 (usp4)
Ubiquitin system [BR:
cvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107093343 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
107093343
NCBI-ProteinID:
XP_015243830
Ensembl:
ENSCVAG00000001021
UniProt:
A0A3Q2C6A3
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MRESACRVSSSFSTSLRLRLLGGSCLMLVHQPARSRHRSTRCMMAEGGGPESGSAADSDS
EPVAAQMPTPSIENQKQTIGSLLKTTLKKGDDWYLIDSRWFKQWKKYVGFDSWDMYNVGE
RSLYPGPIDNSGLFSDQETQALKEHLIDELDYVLVPTEAWNKLVSWYRCLEGQRPIVRKV
VEHGMFVKHCKVEVYLLELNLCENDNMENVITRHFSKADTIDTIEKEMRTLFNIPSEKET
RLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGTWPRQALQPKSSATPSRNC
STSPKLSSNSSVGASPTVTNGDSSSSPGYALNNSTSSNNRYGGYNSYSSSYNYRESQSQP
GLCGLSNLGNTCFMNSALQCLSNVSLLTEYFLTDQYEAEINRENPLGMRGEIAEAYADLV
KQMWMSRNSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLA
LRDAEGRPDDIVAKEAWTNHRLRNDSVIVDTFHGLFKSTLVCPECSKVSVTFDPFCYLTL
PLPMKKDRTMEVFLVRSDPQSRPTQYRVVVPKLGTVTDLCSALSKLCGIPPEKMVVADVY
NHRFHKIYRRDDALNQIMDKDDIFVYEVQEEDSERMNLPVYFRERHSKHVGSSSSTLLFG
QPLLISVPRHNLLADVLYEKILERIGRYVKQQHNPNGESRASASATLSSCSQAPECSASS
TINASLGGCGSPQSDGASCSASSSNGSNHSGTCTEANGLDDGDDEAMDHQVSPEPENGQS
EEEEESSDLENGSKGETARLFTFSIVNSYGTVNISPLPCNGNVLKLNPHSTVAIDWDTES
KKLYYDEQEAEAYEKHESMLQPQKKKTTVALKECIELFTTMETLGEHDPWYCPTCKKHQQ
ATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTLVDFPIRDLNMSEFVCDPKASPYVYDL
IAVSNHYGGMGGGHYTAYGKNKMDEKWYYFDDSSVSSASEDQIVTKAAYVLFYQRREEEN
PLKAEPSASLGGAAEAADDHMDTN
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagcgcctgcagagtcagcagctcattcagcaccagcttgcggctgcggctt
ctgggaggaagctgtctcatgctcgttcaccagcctgctcgttcacgacaccggtccact
cgctgcatgatggctgaaggaggcggacccgaatccggcagcgcggcagactcggactca
gagccggttgccgcacaaatgccaactccttcaatagaaaaccaaaaacaaaccattggg
tcacttttgaaaacaactttaaaaaagggagacgactggtatctaatagacagtcggtgg
ttcaaacaatggaagaaatatgtaggatttgacagctgggacatgtataatgttggggaa
cgcagcctctacccaggtccaattgataattctgggctcttctcagaccaggagactcaa
gccctgaaagagcaccttatagatgagcttgactatgtccttgtacccactgaggcatgg
aataagcttgtcagttggtataggtgcctagagggccagagacccattgtcaggaaggtg
gttgaacatggcatgtttgttaagcactgtaaggttgaagtctatctgcttgaactcaac
ttgtgtgagaatgacaacatggagaatgtcatcacacgccatttcagtaaagctgacact
atagatactatagagaaggagatgaggacattgttcaatatcccttcagagaaggagacc
agactctggaacaaatacatgagcaacacatatgagcagctgaacaagccagacagcact
gtacaggatgctggtctcttccagggacaggtgcttgtgattgaacgcaagaatgaggat
ggcacgtggcctagacaagctttgcaaccaaaatccagtgcaactccatctagaaattgt
tctacctccccaaaactttcatcaaattcatcagttggtgcatctccaacagtaaccaat
ggcgacagcagcagtagccctggttatgctcttaataacagtacctcctctaacaacaga
tatgggggatacaattcgtatagctcctcctacaactatagagagtcacagtcgcagcct
ggcctgtgtggtctcagtaatctgggtaatacatgcttcatgaactcggctctccagtgc
ctgagcaatgtgtctctactcacagagtacttcctcacagaccagtatgaagctgagatt
aaccgagagaatcctctgggaatgaggggggagattgccgaagcttacgcagatctggtg
aagcagatgtggatgagccgcaacagttatgtggcccctcgtacctttaaaacccaggtt
ggaagatttgctccgcagttttcaggctatcagcagcaggactctcaggagctgttggcc
ttcctgctggacggactccatgaagatttgaaccgtgtcaaaaagaagccttacctggcc
ctgagggatgcagagggtcgtccagatgatattgttgcaaaggaagcctggacgaaccac
cgcttacgcaacgactccgtcatagtggacactttccatggcctctttaaatccacatta
gtctgcccagagtgttccaaagtgtctgtgacctttgaccctttctgttacctcacgctg
cctctccctatgaaaaaggacaggaccatggaggtgtttttggttcgatcagaccctcag
tcaagacccactcagtaccgagtggtggtccccaaactgggaacagtcacagacctctgc
agcgcactgtccaaactctgtggaattcctcctgaaaagatggtggtagctgacgtttac
aatcacaggttccataaaatttacagacgggatgacgccctcaaccaaatcatggacaag
gatgacatttttgtgtatgaggtccaagaggaggacagtgagaggatgaacctgcctgta
tatttcagggagcgccactctaagcatgttgggagctcttctagcaccttgttatttggc
caacctttacttatctccgtgcccagacataacctgttagctgacgtcctttacgagaag
atcctggaacggattggacgctatgttaaacagcagcacaaccctaatggtgaaagccga
gcatcagcatcagctactttatccagctgcagtcaggctcctgaatgttctgcatcatct
accatcaatgccagtctgggcggctgtggcagcccccagtcagacggggcctcttgcagt
gccagctccagtaatggtagcaaccactccggaacctgcactgaagctaatgggctggat
gacggtgatgacgaggccatggatcaccaggtgagtcctgagccagagaatgggcagtct
gaagaagaggaggagagctcagacttggaaaatggctccaaaggagagacagcgaggctc
tttacttttagcatagtcaactcctatggcacagtcaatatcagcccgctgccgtgcaat
ggaaatgtcctcaaacttaacccacattctacggtggcaatcgactgggacacggagtca
aagaaactgtactatgatgagcaggaagcggaggcctatgagaaacacgagagcatgctg
cagcctcaaaagaagaaaacaactgtggctctgaaagaatgcattgagctttttaccacc
atggagactctgggagaacatgatccttggtattgtccaacatgtaaaaaacatcagcaa
gcaacaaaaaagtttgacttatggtcgctgccacgcatcctggtcgttcatcttaagcgt
ttctcttacaatcgatgctggagggacaagcttgacacgctggtggactttcctatcagg
gatctgaacatgtcagagtttgtctgtgatccaaaggccagcccttatgtctacgacctc
attgctgtttcaaaccactacggaggaatggggggtggtcactataccgcttatggcaag
aataaaatggatgaaaagtggtattacttcgatgacagcagtgtctcgtctgcctccgaa
gatcagattgtgactaaagcagcctacgtgctgttctatcagcgcagagaagaggaaaac
cccttaaaagctgagccatctgcctcgctgggaggagctgccgaggcggcagacgaccac
atggacacaaactga
DBGET
integrated database retrieval system
