Cyprinodon variegatus (sheepshead minnow): 107095568
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Entry
107095568 CDS
T06110
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107095568
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Cadherin related
107095568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_2
Cadherin_pro
Cadherin_4
Big_9
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
107095568
NCBI-ProteinID:
XP_015247193
Ensembl:
ENSCVAG00000008312
LinkDB
All DBs
Position
Unknown
AA seq
3280 aa
AA seq
DB search
MKTAAKGLGKSKMDPLHSEGWFGIRIVLMVYVLLELLTLNSSFVLGTLELQLDEEQPAGT
VVGDISAGLPPGVTASLYFISDHEGTGVGSDLDIDESTGIIKTAKVLDRELRDRYSFIAV
TMTGVTVEVTIKVNDINDHVPKFPRKRATFKIPEQTAIGTRFPLEPAVDSDKGEFTTQGY
IIKDGNVGQAFTLETRRGSSEVLFLDLVVNGILDREKRSTYTLLLEAFDGGSPKRTDQMT
LDIIVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFATDADEGDNGLVLYEINRRQSD
PDRYFVVDTSSGIITLNKQLDFEMRRVHELVVQAQDNATHPEVTNAFVTIHVRDYNDNQP
TMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFGLTTKDSI
IYLVCVDQILDREERDTYELRVMATDSGTPPLRAESSFVIQVTDINDNPPLFDHPVYRQV
IPEVVFPGSFVLQVTARDKDHGPNGDINYSILEDPSGYYSWFSIDSITGIITTLSQLDYE
KNPNPSITVVATDGGKPPLSSTSVVNIVLQDINDNEPVFERNFYNVSIKENTPPGTCILQ
VTATDADGGSFGSVSYSLGSGSNSAVPSQFTIGKETGQICTNVVVDRDQGPDSFDFTVTA
VDGGGLSSVAYVKVDLVDVNDNRPAFYPLSYAVSLSTQSAPGTSVLRVMAYDPDSGENGK
ITYKTLPGGASPYFTLNKDTGVISLSRSVYGKANSVIPMVISAQDGGGLLALENARVNIS
VVAGLVAPPVFEQAQYYFTVSEDALRGTVVGIVQASSKTGNSRGIAYTISSGDPAGYFTV
DPDTGALRTSLPLDHETQPILDIEVQARSGNPPAFGQTRIQITIADINDNPPVFLPSSSE
SLLLPENTEMGTVVYRIQAEDRDSGLNGQLSFDLSSPSGIQRIFSIERSTGEIRLVGSLC
YETNPRYDLLVIAKDKGVPQLSATLMLVVHVQAENDQGPVFDTLTYRVELKEGAPINTRF
LQVRAMSREIPGSGNLSPLMYHLRPDGDAAGFGIAADSGWLFIKNSLDREQKDIYLLTVL
ASVSHGGLKKTGSATVRISVTDENDNAPRLAQQRVFMAVRENLPAGTGFGHVLATDRDSG
SNGRLSYRFLHTDRHFQINSYTGEISTRMTLDREQQSSYQLMVVVQDGGSPPRSATGTVF
ITLLDDNDNDPAFIHSQSGKNILIQVKEGQPAGAVLGTLQAKDPDEGENGTIVYSLSGPR
AERFSLNAITGELHSSSPLSHSERAEYSLTVTATDRGLPPRSTSCSLTIQVISKSSQDTK
TRTHSVIFNSVEEEATPGTVIGTVCLHDRKTTEEGKVTYTVIGGTDQDGTFVVDRLTGDV
YLACPLDYERDKRYSLKIEVDDFSQVPPRSTLVNLDIDIEDSNDHSPEFAEDPITIVISE
NTEAGSSVYTFQATDKDGSGPNSELLYSILQQWPNTPGLFKLDPVTGILSLGHKLDHEVT
STMMLVVKATDSALNASQRHWGSVTARIYVTDENDNPPVFISPTAVSVMEDQPVGFVVLF
LMARDADQGENGRVTYKIQSGNTGGTFSLNPNTGSLSIFKSLDREEQDIFNLTVTAEDHG
IPQRSSSQILCVQVIDVNDEVPWFEESHYEAQISENKPAGTSVLTVSASDLDQGTNGLVT
YHISQGSFTINPVTGVITTTKSLDRELQDYYSITVYAKDGGLPPNYAKATVKIKILDAND
NAPVFGRLYHSIEVPENMEALPLFTVKATDPDEGDSGEIHYRISAGDPSGNFHIDQKTGL
LYTSRPLDREKRPGYTLTVVAQDKGSLPLSSSTTVEVTVLDSNDHSPQFESSSYTADIAE
DVPIGSLVLQVRAIDLDNGPNSQILYFLSHGSQSMFIIDQNTGRIITAAALDREKTASYT
FMVCATDSSPTNPLNSTAEVTIYIQDVNDHSPFFIQDPLILNISASSISSRGILATMRAE
DKDFGANGSVFYRFANPVRGFTINSLTGDIQCTEKLQSLTQTQRTLIVQAMDQGNPAQSS
LGVVIIYIKEQNYRGIRFSRTARDVSLQENAAKGTVVTKTEAQYPDGSKTGIIYSIFSGN
KLQSFGINPITGEIWVQKSEGLDFEETPKLRLVVKAETSSSSSYMAVNLILQDVNDNLPR
FQLQNYVAYIREAQGHNSPIIQVAADDMDQGQNAQVTYSIRSSSMSGLFKIDPLTGSITT
GAIMDREIWTQTKLVVVATDRGTPRLAGSATLTVIIVDLNDNSPMIPVPREIRVPEDTLI
GTVITRVTGNDVDSEPPLSYTLHLDANSQGMFGIHHYGGGVSLTGSLDHEERTWYTLTVR
SSDSKHQSEANLTILVDDVNDNAPVFTQDFYQVTVSEHQGAGSALITLTATDRDSGENGK
ITYRVMSSTKGAFFIDPNNGTLFINQKTELDFEHPSILVAIEARDHGTPSLSSIATVQIH
VSDVNDNAPVFHQSEYRATVSEDGLPGSTVLTLEAVDGDLFRENCGFDFAIASGNSGNTF
QIESSVHFLEGQGFQTVGSLILMEKLDFEAFPTYNLTVVVSDRGIPQRSSSVPVLISITD
ANDNPPTFSRTDYSVVLSEGVAIGTEILHLSATDPDSAPNGEVQYTISSGDQTNLFEVDR
WTGVLRLQRPLDSKAQLSHMIVVQATDVQGHYALAAVHIEVKDINDNRPFFPLKSVTASV
RENQPPNALVTMLHAVDHDKGVFGQLKYYLLDTSKDRQEDFFINQTSGEVRTRSTFDFEK
VNYFYFVAVAMDAGNYSATVTVQVYVTGEDEYDPVFISSDFTFEVPEGAKRGQIIGKVHA
SDEDGGVDGIVLYSLSEHSPYFEVNESSGEISIKMDSSSRHVSRSKREIRVITLEVTAHS
PVDTSRTAVAKVFVDVSHTSFGLTTDMSMLLVSVIAVSLGTIMILIVIAVALFFVRLQRR
KREQRTHKRNPMSGTLLHNFEETKLAASEIIYHQTLPGYASDQSGNVGGPYTRGGSLDPS
HSSGRGSAEAAEDDEIRMINEYPRVSSISSSMQERISARGPDSGIQQDADQLSDVSCEPS
LDWFKGKKVSSTNSTLIAGQVPVYRDDRGGYVGVGRGLSISQPKDYTFPEDGKPPVDGSL
TAIVAGDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDETAPSHSRRSFQHKAKAES
RIDPPPLITSVAHPGAKTVPPKLAITRTFSHLASLRRSPISAEGSISSVAMSPSFSPSLS
PLAARSPAVTPFSVSQGPSASLISTTEHSFEHSDEADLRI
NT seq
9843 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagctgccaagggtcttggaaagtctaaaatggatccattgcactctgagggt
tggtttggcatcaggatagtgttaatggtatacgtactattggagcttttaacactcaat
tcatcttttgttcttgggacccttgagctacagctagatgaggaacaaccagctgggaca
gttgtgggggacatcagcgcaggacttccacctggtgtcacagcttctttatatttcata
tctgaccatgagggcacaggagtgggtagtgatttggacatagacgaaagcacaggtatt
attaaaacagctaaagttctggacagagagttgagagacagatacagcttcattgcagta
accatgacaggtgtgactgtcgaagtgactatcaaagtaaatgatataaatgaccatgtt
ccgaagtttcccagaaaaagagccacatttaaaattcctgagcagacggctattggcaca
agatttcctctcgagccagctgtggacagtgataagggagagttcaccacacagggctat
attattaaggatggaaatgttggccaggcattcaccttagagacaagaagaggaagcagt
gaggttctctttctcgacttggtggtcaacggcattctagaccgagagaaaagatcaacc
tacacattattgttagaggcctttgatggtggttcacccaagaggactgatcagatgacc
ttagatattatcgtacaagatattaatgacaacgctcctgtttttaaccagagccgctat
catgcaataatatctgagaatctccaaccaggaagcaacatcctgcaggtttttgcaaca
gatgctgatgagggagataatggactggtactatatgaaatcaacaggaggcaaagtgac
ccagatcgatactttgttgtggacactagctctggcatcattacattgaacaagcagctg
gactttgagatgagaagagtacatgaactggtggtccaggctcaagacaacgcaacccac
cctgaagtaaccaatgcctttgtaaccattcatgtcagagactacaatgacaaccaaccc
accatgaccatcatctttttgagtgaggatggctctccaagaatctcagaaggtgcccag
ccaggccagtatgtagcacgaatctcagtcactgacccagactatggagagtacgctaac
gtcaatgtgtcattagaaggcggagatggaaagtttggcctgacaacaaaagatagcata
atatatcttgtatgtgtggaccagattctggaccgggaagaaagggacacctatgagctg
agggtgatggcgacagattcaggcacacctccacttagggcggagtcttcctttgtcatc
caggtgactgatataaatgacaacccacctctttttgatcatccagtgtacagacaagtg
atccctgaggtggtcttcccaggcagctttgtgttgcaggtaactgcgagagataaagat
cacgggccaaatggggacattaactacagcatcctcgaagatcccagtggctactacagc
tggttcagtatcgactccattacgggcataatcaccacgttatcccagcttgattatgaa
aagaaccctaatcccagtataactgttgtagccacagatggaggcaaacctcccctttct
tccacatcagtggtaaatatcgttcttcaggatataaatgacaatgagcctgtttttgag
agaaacttctacaacgtctccatcaaggaaaacacgccaccagggacctgcattcttcag
gtgacggcgacagatgcggatggaggctcctttggctctgtctcctactcccttggctct
ggcagtaacagtgctgttccctctcagtttaccattggcaaggagacgggccagatctgc
actaacgttgtagtagacagggatcaagggccggacagtttcgacttcactgtaactgca
gtagacgggggtggactgagctcagtagcctatgtgaaggtggacttggtggacgtgaac
gataatagacccgctttttacccactcagttacgctgttagtttgagcacacagagtgcc
cctgggacatctgttcttagagtgatggcctatgacccagactcaggcgagaacggcaaa
attacatacaaaacactacctggaggagcctccccatactttaccctcaacaaagacaca
ggtgttatctccctgtctcggtcagtctatgggaaagccaactccgttattcccatggtt
atctctgctcaagatggtggtggcctcttggctttagaaaatgcaagagtcaacattagt
gtggtggcagggctggtggcaccccctgtattcgaacaggctcagtactactttactgta
tcagaggacgccctgcgtggaacagtggtcggcatcgtccaggccagcagtaagacaggt
aattccaggggcatcgcttacacaataagctctggggacccagcaggctacttcactgtg
gatcctgacactggagccttaaggaccagtctgccactggatcatgaaactcagccaatt
cttgatatagaagtgcaggcccgcagcggcaaccctcctgcatttggacagactcgtatt
cagatcaccattgcagacatcaatgataatcctcccgtgtttttaccctcgtcctcagag
tctctgctactgccagagaacacagaaatgggcacagtggtgtatcgcatccaagcagag
gacagagactcagggctcaatggacagcttagcttcgacctttcctctccaagtggaatt
cagaggattttcagcatagagcgcagcactggagagattcgactggttggaagcctctgc
tatgaaactaacccccgctatgacctcttggtgattgccaaagataaaggcgtgccccag
cttagtgctaccctgatgcttgtggttcatgtgcaagcagagaatgatcaaggtcctgta
tttgataccctcacttacagagttgaactaaaagaaggagctcctataaacactcgcttc
ctacaagtcagggctatgagcagagagatcccaggctcaggtaatctgagcccactaatg
tatcatcttcgtccagatggagatgccgcaggattcggcatagcagcagacagtggctgg
cttttcataaaaaactccctagacagggagcagaaggacatatatctcctaacggtgctt
gccagcgtgagccatggagggttaaaaaagacggggagcgccacggtccgcatatctgtg
accgatgagaacgacaatgctcctcggctcgcccagcagagagttttcatggctgtgaga
gagaatctgcctgcagggacaggttttggtcatgtgttggccacagatagggacagtggg
tctaatggacgcctcagctaccgcttcctgcacactgaccgccacttccagataaacagc
tacacaggtgaaatcagtacaaggatgactctcgacagagagcagcagtcaagttatcag
ctgatggtggtggtacaagacgggggttcaccccctcgctctgcgacgggcaccgtcttc
attactctacttgatgacaacgacaatgacccagcttttattcatagtcaatcagggaaa
aatatcctcattcaggtgaaagaaggtcaacctgctggtgctgtgctgggaacgctgcaa
gccaaagatccagatgaaggagagaatggcacaatagtgtactccttatcaggtcccagg
gctgagcgtttctctttgaatgcaatcaccggcgagctgcactcatcatcccctctcagc
cactcggaaagggccgaatattctctgacggtgacagccactgacagaggactacccccg
cgcagcacctcctgctcccttacaattcaggtgatcagcaaaagcagtcaagacactaag
acgaggacccactccgtaattttcaactctgtggaggaggaggccactcctggcactgtt
attggcacggtttgcctccatgacagaaaaaccaccgaagagggcaaggtgacgtacaca
gtgatcggaggcaccgatcaggatgggacttttgtcgtggaccgcctaactggtgatgtt
tacctagcttgtcctcttgactatgaacgagacaaaaggtacagcctgaaaatcgaagtg
gatgacttctcgcaggtccctcctagaagcacgctagtcaacttggacattgacatagaa
gacagcaacgaccattcccctgagtttgctgaagaccccatcacaatcgtcatctctgag
aacacggaggcaggctcctctgtttatactttccaggcaacagataaggatggcagtggg
cctaatagtgaactgctatactctattctccagcagtggccaaatacccctgggcttttc
aaacttgaccctgtcactggtattctctctttgggtcacaagctggatcatgaggtcacg
tcaacaatgatgctggtcgttaaggcgacagattcggccctcaatgccagccagaggcat
tggggttctgtcacagcaagaatctatgtaaccgacgagaatgacaatccaccagtattc
atatcgccaacagctgtcagcgttatggaggaccagcctgtgggctttgtggtgcttttt
ctgatggccagagatgctgatcaaggggaaaatggaagggtgacctataaaatccaatca
ggcaacacaggagggacatttagcctcaaccctaacacaggctctctctctattttcaaa
tcactggaccgtgaggagcaggatatctttaacctcacagtaactgcagaggatcatggg
atacctcagcgctcttctagtcagattctgtgtgtccaagtgattgatgtcaacgatgaa
gtgccctggtttgaagagagccattatgaagcacaaatctctgagaacaaacctgcagga
acaagtgttttaacagtgtcggcttctgatctggatcaaggaaccaatgggcttgtgaca
tatcacatctcacagggaagtttcacgatcaacccggtcacaggggtcataacaaccact
aagtctttggatagggagcttcaggattattattctatcacagtttatgcaaaagatgga
ggcctcccacccaactatgctaaagcaacagtaaagatcaagatccttgacgccaatgac
aacgcccctgtttttggacgtctctaccacagcatagaggtgcctgaaaatatggaggcg
ctacctctttttaccgtaaaggccacagatccagatgagggagacagtggagagattcac
tacagaatttcagccggggatccatccggaaacttccacattgaccagaaaacaggcctg
ctgtatacttcaaggccactagatcgggaaaagagacctgggtatacattaacagttgta
gctcaggacaagggcagtcttccacttagcagtagtactactgttgaagtgacagttctt
gacagtaatgaccacagtccacagtttgaaagcagcagctatactgcggacattgcagaa
gatgttcccatcggttccctggttctacaagtccgagccattgatttggacaatggaccc
aacagtcaaatcctctacttcctgagccacggctctcagagcatgttcatcatagaccag
aacacgggccgtattatcacagctgcagccctagatagagagaaaactgcctcatacact
tttatggtgtgcgccaccgattcctctcccacaaaccccctgaattcaactgctgaagtt
actatctacatccaagatgtgaacgaccactcccctttcttcatccaggatccacttatt
ctgaacatctctgccagctccatttctagtcggggaatcttagccacaatgagggctgaa
gataaggactttggagctaatgggtctgttttttatcgttttgccaaccctgtgaggggg
tttacaatcaactcactaacaggagacatccagtgcacagaaaagcttcagtccctcacc
caaacccagaggactctgattgttcaggccatggaccaaggaaatcctgctcagtcttca
ctgggagttgttatcatttatattaaggagcaaaactacagagggatccgcttttctcgt
acagcaagagatgtcagtttacaagagaatgctgcaaaaggaacggtagtgacaaagaca
gaagcccagtatcccgatggctccaaaactggcatcatctacagcatttttagtggaaac
aaattgcagtcttttgggataaaccccattacaggggaaatatgggtgcagaaatctgaa
ggactcgactttgaggaaaccccaaaactccgccttgttgtgaaagcagaaacatcgtct
tccagctcctacatggctgttaacttgattctacaggacgtgaatgacaacttgccccgc
ttccagctccagaactatgtggcatacatccgagaggcacagggacacaattcccccatt
atccaggttgctgcagatgacatggaccagggtcaaaatgcacaggtgacatactccatc
aggtcatcgtccatgagtgggttattcaagattgaccccttgactggaagcatcaccact
ggtgccatcatggaccgggagatctggacccaaacaaagcttgttgttgtggcaacagac
cggggaaccccacggctggctggctctgccaccctaactgtgatcatcgtagacctcaat
gacaacagtcccatgattcctgtgccacgagagatccgggtgcctgaggatactcttatt
gggacagttatcacccgggtcacaggaaatgatgttgactcagaaccaccgctgtcctat
acattacacctggatgctaacagccaaggcatgtttggaattcatcattatgggggagga
gtgtctttgaccggctctcttgaccatgaagagaggacgtggtacacgctgacggtgcgc
tcatctgactccaaacatcaaagcgaagccaatctcaccattcttgttgatgacgtgaat
gacaatgcccccgtgtttactcaggatttctatcaggttactgtgtcagagcaccaagga
gcaggcagtgcactgatcaccttaacagccactgaccgtgactctggcgagaacggcaaa
attacctacagagtgatgtcatccactaagggggcattcttcattgatccaaataatgga
actctttttatcaaccagaagacagaactggattttgaacatccttccattcttgttgct
attgaagcaagggaccatggtactccatctctatcatccatcgccactgttcagatccat
gtatccgatgtcaatgacaacgctccagtttttcaccagtccgagtacagagccactgtc
tctgaggatggccttcctggatcaactgttctcacattagaagccgtggatggagacctt
tttcgggaaaactgtggttttgattttgcaattgccagtggcaactctggtaataccttc
cagattgagagtagtgtgcacttcctggagggtcagggattccagacagtcggcagcctg
attctgatggaaaagcttgactttgaagcattcccaacttataacctgactgttgtggta
tcagatcgggggatcccccaacgtagctctagtgtgccagtcctaatcagtataacagat
gctaatgacaaccctccaacattcagtagaacagattacagtgttgtactaagtgagggt
gtagcaatcgggacagagatcttacatttatcagccacagatccagactctgcccccaat
ggagaggtgcagtacactataagttcaggagatcagacaaatctgtttgaggtggatcgt
tggactggagtactgaggctacaaagacctttagacagcaaagcacagctatcccatatg
attgttgtccaggcgactgatgttcagggccattatgctttggctgcagtacatatcgag
gtaaaagacataaatgacaacaggcctttcttccctcttaaatcagtaactgcaagtgtc
agggagaaccaacccccaaatgccttagttacaatgctgcatgcagttgaccatgataag
ggagtctttggacagctgaagtattacctcttagatacctctaaagatagacaagaggat
ttcttcataaatcaaacatcaggtgaagtacgaacacgctctacatttgactttgagaag
gtcaactacttttattttgtagctgtcgccatggatgctggcaattattctgccaccgta
acagtacaggtttatgtcacaggtgaggatgaatacgatcctgttttcatctcatcagac
ttcacatttgaagtgcctgaaggagcaaagagaggtcagatcattggcaaagtacatgcc
agtgatgaggatggaggtgtggatggcattgtcctttactcattatcagaacattcgcct
tactttgaagtcaatgaatcaagcggagaaatttcaataaagatggacagcagtagtaga
catgtgagccgctctaaaagagagatacgtgtgattactctggaagtgactgctcacagc
cctgtagatacttctcgcacagcagtggccaaagttttcgtagatgtcagccatacatcc
tttggccttactacagacatgagcatgttgcttgtcagtgtcattgctgtttcgcttggg
acgataatgattttgatagtaattgctgtggcactattttttgttaggttgcaacgtcgt
aaaagggagcaaagaacccataagagaaacccaatgtcaggcaccttactgcacaatttt
gaggaaacaaaactagcagcaagtgaaattatatatcatcaaacccttcctgggtatgca
tctgaccaaagtggtaatgttggtggaccatacactcgtgggggttcccttgatccgtcc
cactctagtggccgtggatctgcagaggcagctgaggatgacgaaatacgaatgattaat
gagtatcctcgagtgtcaagcatctcttcttccatgcaggagcgtatttctgcccgaggt
ccagactctggaattcagcaggatgctgatcagctctcagatgtttcatgtgaaccatct
ttggactggtttaaaggaaagaaagtgagcagcacaaatagtactttgatagctggccag
gtgccagtctacagggatgataggggtggatacgtaggtgtcgggcgaggactcagcatc
tcccagccaaaagactataccttcccagaggatgggaaaccccctgtggatggctccctt
acagccattgtggcaggtgatgaggagctgaggggcagctacaactgggactaccttcta
aattggtgccctcagtttcaacctttagctaatgtttttacagaaatagcacgtttaaaa
gatgaaactgctccctctcattcccggaggtcatttcaacacaaagcaaaagcagagtcg
aggattgaccctccgcctctcataacctctgtggcccaccctggggccaaaactgtaccc
ccaaaacttgcaatcacaaggactttctctcacctggcctcgttacgaagatcacccatc
agtgctgaggggtccatctcctcggttgcgatgtctccaagtttttctccatctctttca
ccgctggcagcacgctctcctgcagttacacccttcagtgtctcacagggcccctctgcc
tccttgattagcacaactgaacatagttttgaacacagcgacgaggcagacctacggatt
taa
DBGET
integrated database retrieval system
