KEGG   Cyprinodon variegatus (sheepshead minnow): 107097491
Entry
107097491         CDS       T06110                                 
Symbol
itga11
Name
(RefSeq) integrin alpha-11 isoform X1
  KO
K06587  integrin alpha 11
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510  Focal adhesion
cvg04512  ECM-receptor interaction
cvg04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107097491 (itga11)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107097491 (itga11)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    107097491 (itga11)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cvg04515]
    107097491 (itga11)
Cell adhesion molecules [BR:cvg04515]
 Integrins
  Integrin alpha subunits
   107097491 (itga11)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 VWA_2 Integrin_A_Ig_1 FG-GAP_3 Integrin_A_Ig_3 FG-GAP_2 VWA_CoxE VWA_3 LYRIC
Other DBs
NCBI-GeneID: 107097491
NCBI-ProteinID: XP_015250129
Ensembl: ENSCVAG00000020710
UniProt: A0A3Q2G4E4
LinkDB
Position
Unknown
AA seq 1192 aa
MEYYCFLLLWICSQHLGFHDCFNIDIKTPRIIKGPKQAQFGYTVQQHVAAGGDKWLLVGA
PYENTGNFQTGDVYKCAVNKRTNGNSCSKLNLGKISLTNVSERKNKMRLGMTLVSNPKDS
SFVACGPLWSYECGSSYYSTGICSKVNASFKFSRTIIPAFQRCETFMDIVIVLDGSNSIY
PWSEVQNFLINILQKFHVGPGQIQVGVVQYGEKVVHEFKLSDYKSVEEVVKRARSIDQRG
GEETNTALGISTARSQAFKQGGRRGAKKVMIVITDGESHDNADLQQAIEDSEKDGITRYA
IAVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFNVTDESALNDIVDALGERIFSLEGTS
KNGTAFGLQMSQAGFSAHNVEDGILVGAVGAYDWNGAVLKETRQGKVIPPKSSYMQEFPE
ELKNHGAYLGYTVTSVVSSRNGRLLVAGAPRFNHTGKVIVFTLKNTGNLTILHSLKGHQI
GSYYGSEIAPLDIDGDGITDNLLVAAPMFFSAGLEKGKVYIYRVTELNRFIPEGALEIHN
GGQNARFGSSLAPVPDLNGDGFNDLVVGAPLEDDHKGAIYVFFSQQNRILRKYKQRIAAV
DLAAGLQYFGRSIHGTMDMNDDGLVDLAVGSLGAAVLLWSKSVVRIYTNVRFEPSKVNIF
MKDCQRGGKDVTCMSAIVCFNITARTAVPPTQEIGIRYNVSILERRFNPRAILDQPNKMQ
PQNLTLSPGEEACEYIYFHVMETTDYARPIVFAVQVGLQDPDQGPVLDDSWPVVVKTELP
FWNGCDEDDRCMPNLSLQSKNDLMTRKQFCARPMQSRGLFCRHQGGAEAEGSLRVIEGNK
KRMVLDVKLENRGENAYNAVINITYSPNLRFSSLIVKDTSEIKIECNAVDRKRNEKICNV
SAPFMRAKSQVLFRLEFEFSRTIFLEYLRVLLEASSDGEEVNISDNFDDIYYSLKYEGDL
LFTRDSDPTRYEIKSELSLEEPGIIGPPFNFTFQLQNLGYFPVRDLQLNIEIPEMTKNGN
QLLQIFNLHVDQRDGTSCLPPQHIAESRASPEDLSRFSRLNRSNTLTLPIQCTVNVPSHR
DVWVQITGALRIDTLHALKFKVLELITSASVELPSASPMFLHEEKPVRHIILEIRKEGDY
RIPTWIIVGSTLGGLLLLALLSLALWKLGFFHRQKRKDKEEQEANGKVAEER
NT seq 3579 nt   +upstreamnt  +downstreamnt
atggagtactactgcttcctcctgctctggatttgcagccagcatttagggttccacgac
tgcttcaatattgacataaagacaccaagaatcatcaaaggtcctaagcaagcccagttt
ggatacactgttcagcaacatgttgctgcaggaggagataaatggttattagtgggagcg
ccatatgaaaacactgggaatttccaaacaggggatgtatataaatgtgcagttaacaaa
cgaactaatggcaacagttgctcgaagctcaatttaggaaagatatctctgaccaacgta
tcagaacgaaagaacaagatgaggctgggtatgacgctcgtgtctaaccccaaagacagc
agctttgtggcttgtggaccattatggtcatatgaatgtggcagttcttactacagtact
ggaatatgctccaaagttaatgcaagcttcaagttttccagaacgattatccctgccttt
cagagatgtgaaacctttatggacatagtcattgttctcgatggctccaactccatctat
ccctggtctgaagtgcagaactttctcataaacattctgcagaagttccatgttggacca
ggtcaaatacaggttggggttgtccagtatggtgagaaagtggtgcatgaattcaaactc
agtgactacaaatcagtggaggaggtggtaaaaagggctcgcagcattgatcagcggggt
ggagaggagaccaacacggctcttggcatcagtacagctcgctcacaagctttcaagcaa
ggaggtcgacggggggccaagaaggtaatgatagttataactgacggagagtcacatgac
aacgcagatctccaacaggccattgaggacagcgagaaggatggcattactcgttatgcc
attgctgtgctcggctactacaaccgcagaggaattaatcctgaagccttcctaaatgaa
atcaaatacatcgccagtgaccccgatgacaaacacttctttaatgtgacagatgagtca
gctctgaatgatattgtcgatgctcttggggagcgaatatttagccttgaaggaaccagt
aagaacggaacggcgtttggcctccagatgtctcaggcaggtttttccgcacacaacgtg
gaggatgggattctggtgggtgcagttggtgcttatgactggaatggagcggtgttgaag
gaaacacgacaggggaaggtgatccccccaaagtcatcctacatgcaggagtttcctgaa
gagctcaaaaaccatggtgcatacttaggatatactgtaacatccgtggtgtcatccaga
aatggtcgcctgttagtagcaggagctccacgatttaaccacactggcaaagtcattgtc
ttcactttgaagaatacggggaatctcaccatcctgcactcactcaagggccatcagatc
ggctcctactatggtagtgagattgcacctctggatatcgatggagatggcataactgac
aaccttttggtggcagcaccaatgttttttagtgcaggcttggagaaagggaaggtctac
atctacagagtaactgaactgaatcgtttcatcccagaaggagcattggaaattcacaat
ggtggccagaacgctcgctttgggtcctccctcgctcctgtccctgacctcaatggtgat
ggctttaacgacttggtggtgggagcgccgctggaggatgaccacaaaggggctatttat
gttttttttagccagcaaaacagaatactacggaaatataaacagagaatagcagccgta
gatttggctgcaggcctgcagtattttggccgcagtattcatggcaccatggatatgaat
gatgatggtttagtggacctggcagtgggttccctcggtgctgctgttctcctctggtca
aagagcgtcgtaaggatatatactaatgtcaggtttgaacccagtaaggttaacatcttt
atgaaagactgtcagcgtggaggcaaagatgtgacttgcatgtcagctattgtgtgcttc
aacatcactgccaggacggccgttcctcccacacaggaaattgggatcaggtataatgtc
tccattttggagagacgtttcaatcctcgggccatattggatcaaccaaacaagatgcaa
cctcaaaacctgacgctctctcctggtgaagaggcctgtgaatacatctacttccatgtc
atggagaccaccgactatgcaagacctatagtgtttgctgtgcaagtgggattacaagat
ccggaccagggacctgttcttgatgacagctggcctgttgttgtaaagaccgagctgccc
ttctggaatggctgtgatgaggatgaccgctgcatgcctaacctttcactgcagagcaaa
aatgacctgatgactcgaaaacagttctgtgctcgtcccatgcaatctcgtggccttttc
tgccgccatcaggggggagcagaggcagagggatcgctgcgggtgattgaggggaacaag
aaaaggatggtgttagacgtgaaactggagaacagaggagaaaatgcctataatgctgtc
atcaatatcacatattcacccaatctgcgcttctcaagccttatagtcaaggacacatct
gaaataaagattgagtgtaatgcagtggacaggaaaagaaatgagaagatctgcaatgtc
agtgcaccattcatgcgagcaaaatcacaggtcttgtttcgcctggagtttgagttcagt
cgcaccatcttcctggaatacctcagagttctcctggaggcaagcagtgatggtgaagaa
gtgaacatatctgataattttgatgacatctattactcactgaaatatgagggagacctt
ctctttaccagggactcagatccaacgcggtatgagatcaaatcagagctctcactggag
gagcctggaattattggccctccatttaacttcacattccagctccagaaccttggatat
ttcccagttagagatctgcagctgaacatcgagatcccagaaatgacaaaaaacgggaac
cagctcctgcagatatttaacctccatgttgatcagagagatggaacaagctgtttacca
ccccagcatatcgcagagagcagagcttcacctgaggatctctcccgcttctcccgcttg
aaccgatccaacacactcaccttgccaatccagtgcacagttaatgtcccctcccacaga
gatgtctgggttcaaatcacaggagctctgagaatagacacattacatgcactaaagttt
aaagtcctggaactgataacaagcgcttcagtggagctcccctctgccagccccatgttt
ttacatgaagaaaagcctgtcagacatataatcctggagatcaggaaggagggagattac
agaatccctacctggataattgttggcagcacgctgggagggctcttattgttggctctt
ctcagtctggctctgtggaagcttgggttcttccacagacagaagcgaaaagacaaggag
gaacaggaggccaacgggaaagtagcagaggaacggtaa

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