Cyprinodon variegatus (sheepshead minnow): 107100880
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Entry
107100880 CDS
T06110
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04020
Calcium signaling pathway
cvg04148
Efferocytosis
cvg04218
Cellular senescence
cvg04310
Wnt signaling pathway
cvg04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107100880 (nfatc4)
04020 Calcium signaling pathway
107100880 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107100880 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
107100880 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107100880 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107100880 (nfatc4)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
107100880 (nfatc4)
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Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
107100880
NCBI-ProteinID:
XP_015255029
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
FLFAVYLILATWCAVFLYSAHLLQYYLLSLRSNALPPLDWPLPSQFDQFELRIEVQPRPH
HRAHYETEGSRGAVKAAPTGHPVVKLCGYTERKPLSLQVFVGTADDRSIRPHPFYQIHRV
TGKMVGTASHESVQAGTKLLDIPLNPENNMTAIIDCAGILKLRNSDIELRKGETDVGRKN
TRVRLVFRTHLPVVPPVAPPGRVLALQVASLPIECSQRSAQELPVIESVSLTSCSVEGGE
EMLLSGTNFLPISRVLFMERGSDGKLQWEEEAHVNRDNSNECLLCVRVPAYSDLSVSRPV
SVSLYVSNGKRKRSCTHCFKYLPVMFKEEDPLLSRPSVTPLDGVCPVGGPPRMDRGFPVS
DDRGLSFQLPPYLSAYSPPCQVVSYHEEFCSKPDSAVEEPGGSRGTLSERHPSFENLELG
FTELLPPLYSRGPQPPSPSPSPWLDSPYLSSSPSPSHSSSLSPFPTESPLANSPLPPIPT
SPFPQYSAYPQEMCPSPPSNPYQDTCPAPYSHYEGWEPQGRMFGIRHEGEGDAKNQECPL
EFTSSASMHHITFEEVSEFIGEDIQAYQSMNNQSN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
tttctatttgctgtatatctaatactggcaacctggtgtgctgtttttttgtattctgct
cacctgttgcaatattatctgctatcccttaggtctaatgctctgcctccactggactgg
ccgctaccatcccagtttgaccagttcgagctgcgcattgaggtgcagccccgcccacac
catcgagctcactatgagacggagggcagcagaggtgccgtcaaagcagcaccgacagga
catcccgttgtcaagctgtgtggatatacagagaggaagccactgtcgctgcaggtcttc
gtcggaacagctgacgaccgctcaatcaggccacaccctttttatcagatacacagggtc
actgggaagatggtcggtactgccagccatgaaagcgtccaggcagggaccaaactcctg
gacatccctctcaatccagaaaacaacatgactgcaatcattgactgtgctgggattctg
aagctgaggaactctgacatcgagttgaggaaaggtgaaacggacgtcgggaggaaaaat
actcgcgtccgtctggtgtttcgtactcacctccctgtagtgccccctgtggctccacct
ggacgagtcttggccctgcaggtcgcctctttacccattgaatgctctcagcggtcagcc
caggagctgcctgtcatcgagtcagtcagccttacttcctgctctgtggagggaggcgaa
gagatgctgctgagtggcaccaacttcctgcccatctccagagtcctcttcatggagaga
gggtccgatggtaaactacagtgggaggaggaggcacatgtcaaccgcgacaacagcaat
gagtgtctgctgtgtgtgcgggttcctgcctacagcgacctctctgtcagccggcctgtc
tctgtcagtctgtacgtctccaacgggaagaggaagcgaagctgcactcactgcttcaag
tatctgcctgtgatgtttaaagaggaagatccgttactttcccgaccctctgtgacaccc
ctggacggggtctgtccagttggagggcctcccagaatggacagaggtttccccgtttct
gatgaccggggtctcagcttccaactgcccccctacctgtcagcctactcccctccatgc
caagtcgtgagttaccatgaagagttctgctccaaaccagacagcgctgtggaggagcca
ggcgggtctagaggcaccctgtccgaacgtcaccccagttttgagaacctggagttaggc
ttcactgaactgctccctcctctttattcccgcggtccacagcctccttccccgtctcct
tccccgtggctggactctccctacctctcctcttccccctctccatctcactcctcctct
ctcagtcctttccccactgaaagcccccttgcaaactcccctctgccgccgatccccacc
tcgcctttcccacagtactctgcctatcctcaggagatgtgcccctccccaccctccaac
ccttaccaggacacctgtccagcaccttactcccactatgagggctgggaacctcaggga
aggatgtttggtatccgacatgagggcgaaggagacgccaagaaccaggagtgtcctttg
gagtttaccagctctgcctctatgcaccacattacctttgaagaagtgtcagagttcatc
ggagaggacatccaggcctaccagtccatgaacaaccagtccaactga
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