Cyprinodon variegatus (sheepshead minnow): 107101837
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Entry
107101837 CDS
T06110
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04020
Calcium signaling pathway
cvg04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107101837 (ntrk1)
04020 Calcium signaling pathway
107101837 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107101837 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvg01001
]
107101837 (ntrk1)
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
107101837 (ntrk1)
Protein kinases [BR:
cvg01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
107101837 (ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
Ig_2
LRR_8
ig
C2-set_2
TrkA_TMD
LRR_5
Haspin_kinase
CFC
Motif
Other DBs
NCBI-GeneID:
107101837
NCBI-ProteinID:
XP_015256782
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MDVAPRVLVLLLPLALTLLSLSPAPTLGGCPSACRCSFAMMQCLEPNGISSIPPLAPQES
DNVTEIYIENQADLENITETDLVFYRELRNLTITSCKLRLISPNAFQRNLKLQYVNLASN
SLEHISWRVFHFLPLLNLYTCLPEVTISSSQLKTQEGGNLTFECHVTGSPTPNVRWQTKE
LASDYVLQETIMGSSVHLVLQLTNVSSKDNLHNLTCVAENQAGPNEGMVQLDIEFPAKII
FLRDAVPQHNWCFPFAVDGNPEAKISWLYNGFLIRETKYLYSQFIPDSNDGSVKHGCLFL
NKPTHINNGNYTLIVENRLGRDEATAIGMFMDNPFDPSDPEGKIPVPNENQSPTNKPDMD
VTENSESRVFVVSVAVGLAVFACSFLLIMVLVINKCGQQSKFGIHRSSVLGTEDDLAVSL
RFMKFGTSPPSSDEDSGLSSFVENPQYFCGIIKDKDMCVQHIKRQDIVLKWELGEGAFGK
VYLAECANLSPDSDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQHIVRFYGVCTDGE
PLAMVFEYMRHGDLNRFLRAHGPDARMLEESKMPPMGQLTLPQMLHIAAQIASGMVYLAS
LHFVHRDLATRNCLVGEGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRK
FTTESDIWSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVYLLMQGC
WQREPQQRMVIKDIHSRLLELVKNPPVYLDILG
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcacccagggtcctggtgcttctcttgcccctggcgctaaccctgctcagc
ctgtcgcctgcacctactttgggaggatgcccgtccgcttgccgctgctcttttgccatg
atgcagtgcctagagcccaacgggataagcagcatcccaccactggctcctcaggagagt
gataatgtgacagaaatctacattgaaaaccaagcagatctggagaatattacagagact
gaccttgttttctacagagagctgagaaatctcaccatcacatcgtgtaaactgaggcta
atctctccaaatgcttttcaaagaaacctcaagctgcagtatgtcaacctggcgtccaac
tccctggaacatatcagctggagagtgtttcattttctccctctgctcaacctatatacc
tgtttgcctgaagtgaccatatcctcatctcaactgaagactcaagagggggggaacctc
acgtttgaatgtcatgtgacaggaagtcccacccccaatgtgagatggcaaactaaagaa
cttgcctctgactacgttctgcaggagacaatcatgggctcctcggtacatctggtgctt
caactcaccaatgtttcctccaaggacaacctgcacaacctgacgtgtgtggctgagaac
caagctgggcccaacgaggggatggtgcaattggacattgagtttccagccaaaatcatc
ttcctgagagacgctgtgccgcagcacaactggtgcttcccgttcgctgtggatggcaat
ccagaggcaaagattagctggctgtacaacggcttcctaatcagagaaaccaaatacctc
tacagccagttcatccctgactcaaatgacgggtcggtaaaacacggctgcctcttcctc
aacaagcccacccacatcaacaatgggaactacacgctgattgtggagaacaggcttggc
agggacgaggccacggctattggaatgtttatggacaatccttttgatccgtcggatcca
gaggggaaaattccagttcctaatgagaatcaaagtccaacaaacaaacctgatatggac
gttacagagaattctgagagtcgggtgtttgtggtgtctgtggctgtgggccttgcagtg
tttgcctgcagctttctgctcatcatggttctggtcataaacaagtgtggtcagcagtcc
aagtttggaattcaccgctcatcagttctgggtaccgaggatgacctggccgtctcactt
cgtttcatgaagtttggaaccagcccgccttcctcagatgaagactccggtttatcaagt
tttgtggagaacccgcagtacttctgcggcatcatcaaggacaaagacatgtgtgtgcag
cacattaagcggcaggacattgtgttgaaatgggagctcggcgaaggagcgtttggcaaa
gtctacctggcagagtgtgcaaacctcagccccgacagcgacaagatgctggttgccatt
aagaccctgaaggatgcaaacgagtcgacccggcaggacttccagcgagaggcagagctg
ttgacggtcctccagcatcaacacatcgttcgattctacggcgtgtgcacagacggagaa
ccgctggccatggtgttcgagtacatgagacacggagacctgaaccgcttccttcgagct
cacggacctgatgctcgaatgctggaagagtccaagatgcccccgatggggcagctgact
ctaccccagatgctgcacatcgccgcccagatcgcttctggcatggtctacctggcctcg
ctgcacttcgtccatcgtgacctggccactcgcaactgtctggtgggagagggtctggtg
gtgaagatcggagactttggaatgtctcgagacatctacagcacagattactaccgggtc
ggcggacgcacgatgctgccgatccgctggatgcccccagagagcatcatgtacaggaag
ttcacaacagaaagcgacatctggagcttcggggttgttctatgggaaatctttacctac
ggcaaacaaccgtggtatcagctttccaacagtgaggccattgaatgcatcacgcagggg
cgggagctggagaggccacggacctgccccaaggaggtgtacctgctgatgcagggctgc
tggcagagggagccccagcagaggatggtcatcaaggacatccacagccgcctgctggag
ctggtcaagaatccccccgtctacctggacatcctgggttaa
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