Cyprinodon variegatus (sheepshead minnow): 107102293
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Entry
107102293 CDS
T06110
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 2-like
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107102293
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
107102293
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvg01001
]
107102293
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cvg04090
]
107102293
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
107102293
Protein kinases [BR:
cvg01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
107102293
CD molecules [BR:
cvg04090
]
Proteins
107102293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
Pkr1
SoxZ
Motif
Other DBs
NCBI-GeneID:
107102293
NCBI-ProteinID:
XP_015257023
Ensembl:
ENSCVAG00000000775
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MRLYSLLLALALTGCSATESPRPTAIHLNSAIQPNQTEVVLNAGSKIKLSCHGDGLVYMS
TNAFSKLSSEKDIKADPRHTGTYNCGYANQSLSHLDTWIHLYVKGGTSTIFVTPRKTPTT
LKEDDDFLFKCLLTDPSVTNLTFQPEDRRRALPPGMNVTIDPRRGALIKHLRMSFKGQYA
CSGWRDGIEFRSKTLHLLVAPRLRHPPSLFVGQLEAARLEGELFAVTCQTWNPSHFYNVS
WKHPRIQNLNFSESRKYDKGYLYINSTLTISAVSQSHSGLYTCTAVNEAGVAKASTHLTV
LEDPYLRLYMRHKTYDTLKVSGDQFGNFSTRLEKTTEKPADNRITSDNQLGNLVFNVTGI
SNSSANISGCRTVEVYEGGDLTLTLIIEAYPPIGQHHWTTPQHISNDGSSPYETSYVTKG
YRAEANLLLRRVRQEDEGPYSFHFSNFLFNGSQNVELRIYRSPAVSIILQNDSLICSSSG
YPRPTVVWLICTDRDRCDDSSSFQVFPSSIASQEGEEVKILFPLSDHDDITVMCKAHNLV
GESHQVHRSTGLHPMVTPATIGALSVSFILLLLLLVVFYKCRQKPKYEILWKIIESNDGN
NYTFVDPTQLPYNQKWEFPREKLRLGAVLGSGAFGKVVEATAYGLGAENKATRVAVKMLK
PSAHSEEREALMSELKILSHLGYHDNIVNLLGACTQGGPMLMITEYCSHGDLLNFLRAHT
QDFMASMITIDEVGEEVFYKNMTAPQEKLRSDSGISCWSEYQEMQPALSPGPHDHSEHML
SLSICDLMRFSYHVAQGLDFLSSRNCIHRDVAARNVLLTDGHIAKICDFGLARDIRNDDS
YVVQGNARLPVKWMAPESIFECLYTVQSDVWSYGVLLWEIFSLGKSPYPNVVVDANFYKM
IKDGHHMKQPEFAPNEMYHLMKLCWSLEPTHRPTFKTIGQLINRLLPLTGDTLPYQSDEV
TYKNIDERGQEEEVQGRTLKRKEEEQSHHDDCETGGEREPTLKNIYQLS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctattcactgctcctggcgctcgccctcactggctgctctgccacagaatct
cccaggcccacagcgatccacttaaactcagctatccaaccaaaccagacagaagtggtt
ctgaatgctggctctaagattaaacttagttgtcatggtgacgggttggtgtacatgtct
accaatgcatttagtaagttgtcatcagagaaggacataaaagctgatccgagacacact
ggcacatacaattgcgggtatgccaaccaaagcctgagccacctggacacctggatacac
ttgtatgtcaaaggtggcacctcaaccatctttgtcacccctcgaaagactcctaccact
ctgaaagaggatgatgacttcctgttcaaatgtcttctgactgacccttctgtcacaaac
ctcactttccaaccagaagacaggaggagggctctgcccccaggtatgaacgtcaccata
gaccctcggagaggagctttgatcaaacacctgaggatgtccttcaagggccagtatgcc
tgttcaggttggagggatggaatagagttcagatccaaaacacttcacctgctggttgct
cccaggctgcgtcatcccccctccctgtttgtcggccaacttgaagctgcccgtctagaa
ggagagctttttgcagtcacctgtcagacttggaacccttcacacttctacaatgtcagc
tggaaacatccacgcatacagaacctgaatttcagcgaaagcaggaagtatgacaaaggc
tacttatacatcaacagcactctaaccatctccgctgtcagccagtcacacagtggactg
tacacctgtaccgctgttaatgaagcaggggttgccaaagcatccactcacctgactgtg
ttggaggacccctacctaagactttacatgaggcataagacttatgacaccctaaaggtc
tctggggaccagtttggaaacttcagcacaagactggagaagacaactgaaaaaccagct
gacaacagaatcacttcagataatcagctgggaaacctggtttttaatgtgactggtatc
agcaacagcagcgctaacatcagtggctgcaggacagtggaggtttatgaggggggagac
ttgaccctcaccttaattatagaggcctatcctcccatcggacaacatcattggacgaca
ccacaacacataagcaatgatggcagcagcccatatgagacgagctacgttactaaaggc
tacagggccgaggctaaccttctgctgcgacgggtacgccaggaggatgaaggtccatat
tcttttcatttttcgaacttcctctttaacgggtcccagaatgtggagctgcggatctac
cgttctccggctgttagcatcattctgcagaatgactccctgatatgcagcagctctggt
tacccacgccccacagtcgtctggttgatctgcactgacagagacaggtgtgacgacagc
tcaagctttcaggtgtttccatcttccattgcctcacaggaaggggaggaggtgaagata
ctcttcccactgtcggatcacgatgatatcacagtcatgtgtaaggcgcacaacctggtg
ggcgagtctcatcaagttcatcgttctactggacttcaccccatggttactcctgctacc
attggagcactgagtgtctccttcatcctcctcctgctcctgttagttgtgttttacaaa
tgcagacagaaaccaaagtatgaaatcctgtggaaaattatcgagagtaacgatgggaac
aactacacctttgttgaccccacccagctgccgtacaaccagaagtgggagtttcctcga
gaaaaactgcgactcggcgccgttctgggctcgggggcttttggaaaggttgtcgaagct
acagcatatggtctgggagcagaaaacaaagccacaagagttgctgtgaagatgctgaaa
ccaagtgcccactcggaggaacgggaagctctgatgtcagagctgaagatcctcagccat
cttgggtaccacgacaacatcgttaacctgctgggagcgtgcacacaaggaggtcccatg
ctaatgataacagagtactgtagccatggagacttactcaacttcctgcgagcccacact
caggacttcatggcttccatgataaccatagatgaggttggagaagaggtgttctataaa
aacatgacagcaccgcaagagaagctgcgcagtgacagtgggatatcatgctggtcagag
taccaggagatgcagccagccctgagtccaggtccacatgaccacagtgaacacatgctg
agtctgtctatctgtgacctgatgaggttttcctaccatgtggctcagggacttgacttc
ctgtcctccagaaattgtatccacagagatgtagcagcgagaaacgtcctgctgactgat
ggtcatattgcaaaaatatgcgactttggattggctcgcgacattcgaaacgatgacagc
tacgttgttcagggaaacgcccggctgccggtaaagtggatggctccagagagcatcttt
gagtgtctctacacagtgcagagtgacgtctggtcctatggagtcctgctctgggagatc
ttctctctgggtaagagcccataccccaatgttgttgtggatgccaacttctacaagatg
atcaaagatggccaccacatgaagcaaccagagtttgctcccaatgaaatgtatcacctg
atgaagctctgctggagtttggagcccacccacagaccgacctttaaaaccattggtcag
ctcatcaataggctcctccccttgaccggtgacacattaccatatcagagtgacgaggtg
acctataaaaacattgatgaaaggggacaagaagaggaggtccaaggtagaacattgaag
agaaaagaagaagagcaaagtcaccatgacgactgtgaaactggaggggagagggaaccg
acactgaagaacatctaccagctgtcctga
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