Chlorella variabilis: CHLNCDRAFT_12089
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Entry
CHLNCDRAFT_12089 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cvr
Chlorella variabilis
Pathway
cvr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHLNCDRAFT_12089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_12089
03009 Ribosome biogenesis [BR:
cvr03009
]
CHLNCDRAFT_12089
Messenger RNA biogenesis [BR:
cvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CHLNCDRAFT_12089
Ribosome biogenesis [BR:
cvr03009
]
Eukaryotic type
Pre-60S particles
RNases
CHLNCDRAFT_12089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
17357405
NCBI-ProteinID:
XP_005850354
JGI:
ChlNC64A_1_12089
UniProt:
E1Z7Z2
LinkDB
All DBs
Position
Unknown
AA seq
171 aa
AA seq
DB search
GGGMKQPLIWIDLEMTGLDVESDQILQIAVICTDGAMEEVVEGPELAIHQPEEVLQTMNE
WCVEQHGKSGLTQACRDSTTSLAEAEQQVLEFIAGNSVHVDLAFMRKHMPRLVDHLSYRI
VDVSTVGELCRRWFPREHMRAPKKKNTHTALSDIRESITQLLYYRRSIFKK
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
ggcggcggcatgaagcagcccttgatttggatcgacctggagatgacaggactggatgtg
gagtcggaccaaatcttgcagattgccgtgatttgcacagatggggcgatggaggaggta
gtggagggtccagagctagccatccaccagccagaggaggtgctgcagaccatgaatgag
tggtgtgtggagcagcatggcaagtctgggctcacgcaggcatgccgcgacagcaccaca
tcgctggcagaagcagagcagcaggtgctagagtttattgcggggaacagcgtgcatgtg
gacctggctttcatgcgcaagcacatgccgcgcctggtggaccacctgagctataggatt
gtggatgtcagcacggttggggagctgtgccgccgctggttcccgcgggagcacatgcgc
gccccaaagaagaagaacacccacaccgcgctgtcagacatccgtgagtcgattactcag
ctcctatactaccgccgatccatattcaagaaa
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integrated database retrieval system