KEGG   Chlorella variabilis: CHLNCDRAFT_57029
Entry
CHLNCDRAFT_57029  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
cvr  Chlorella variabilis
Pathway
cvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLNCDRAFT_57029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvr03041]
    CHLNCDRAFT_57029
   03036 Chromosome and associated proteins [BR:cvr03036]
    CHLNCDRAFT_57029
Spliceosome [BR:cvr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CHLNCDRAFT_57029
 Complex B
    CHLNCDRAFT_57029
 Complex C
   U2 SnRNP specific factors
    CHLNCDRAFT_57029
Chromosome and associated proteins [BR:cvr03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CHLNCDRAFT_57029
SSDB
Motif
Pfam: SF3b1 HEAT_EZ Htt_N-HEAT_1 XMAP215_CLASP_TOG Adaptin_N CTD IFRD
Other DBs
NCBI-GeneID: 17357592
NCBI-ProteinID: XP_005850015
JGI: ChlNC64A_1_57029
UniProt: E1Z7G3
LinkDB
Position
Unknown
AA seq 1332 aa
MADKGVPLTGSAAYDEELYGGSAGVTGYAAVAQDIEEEEDVDERERAVASKLASYTAPKS
LMNDLPVTDDGDQDGSGFMQSRRIVDRESEYSKRRLDRIISPDRNDAFQMGDKTPDARVR
TYADVMREAQLARERDNTLRNIVEKRKAEAEASEAQLAALDAVPTKASGMAPAAPAAPAA
APAPTATAAAVAAAAATAPGGKRSRWDSSVPIEAKKPKVAAAPEAAPAPAPAAAAPVSDW
DAVEATPAVNRWDATPGQAPSETPGRIWAGGAEATPAGRWDAADGAAQPKRNRWDATPTP
GHGGGEAGPGETPSAAGKRSRWDATPAMAALGATPAYGAGALGATPAWGAGMATPAGGMG
METPTPGMLAAQQAALGAVPMTPEAYQQLKIEREMDERNRPLSDEELDAMLPGAAEGYKI
LSEPAGYEPIRTPARKLMATPTPFGGTPLYQIPEEDRAQKFDVPQQLEGLPEMKPEDQQY
FGKLLKDVDEEELTVEEAKERKIMKLLLKVKNGTPPQRKSALRQLTDKARDFGAGPLFNQ
ILPLLMSPTLEDQERHLLVKVIDRVLFKLDELVRPYCHKILVVIEPLLIDEDYYARVEGR
HVVYCAVPVLHRTALHWPALWEIIANLAKAAGLATMIAAMRPDIDNVDEYVRNTTARAFS
VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLKSLVDIVKHG
LQDENQKVKTITALTIAALAEASAPYGIESFDDVLEPLWKGIRLLRGKVLAAFLKSIGFI
IPLMDAMYANYYTREVMIILIREFQTPDEEMKKIVLKVVKQCVGTDGVEPDYIRQEILPE
FFKHFWVRRMALDRRNYRALVETTVEVAGKVGCSEIVGRVVEDLKDESEPYRKMVMETCD
KVVRGLGAADIDARLEELLIDGILYAYQEQLADESPVVLNGFGTIINALGQRAKPYLPQI
CGTIKWRLNNKSAKIRQQAADLISRIAPVMKKCDEEKLLAHLGVVLYENLGEEYPEVLGS
ILGALKSIVAVIGMTRMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPA
REWMRICFELLDMLKAHKKAIRRATVNTFGYIAKAIGPQDVLVTLLNNLKVQERQNRVCT
TVAIAIVAETCAPFTVLPALMNEYKVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVSPL
LEDALMDRDLVHRQTACSVVQHMSLGVAGLGCEDALTHLLNYVFPNIFEISPHIIQSTTG
AIEGCRVALGPAVILNYLLQGLYHPACKVREVYWRLYNNVYIGAQDALVACYPRMEDEGI
NSYRRHEMDVFV
NT seq 3999 nt   +upstreamnt  +downstreamnt
atggctgacaagggggtgcccctcacgggctctgcagcctacgacgaggagctgtatggc
ggttcggcaggcgtcacgggctatgccgcggtggcgcaggacattgaggaggaggaggat
gtggatgagcgggagcgggctgtggccagcaagctggcctcctacacagcgccaaagtcc
ctcatgaacgaccttcccgtgacggacgacggcgaccaggacggcagcggcttcatgcag
tcgcggcgcatcgtggaccgcgagtcggagtactccaagcgccgcctggaccgcatcatc
tcgcccgaccgcaacgacgctttccagatgggcgacaagacgcccgacgcgcgcgtgcgc
acctacgccgacgtcatgcgcgaggcgcagctggcacgggagcgggacaacacgctgcgc
aacatcgtggagaagcgcaaggcggaggcggaggcgtccgaggcgcagctggcggccctg
gacgcggtgccgaccaaggcgtcggggatggcgccggcggcgcccgcggcgcccgcggcg
gcgcccgcgcccaccgccacggcggccgcggtggccgccgccgcggccaccgcgccgggc
ggcaagcgcagcagatgggacagctcggtgccaatcgaggccaagaagcccaaggttgcg
gcggcgcccgaggcggcccccgcgccagcccccgcagcggcagcccccgtgtcggactgg
gacgccgtggaggcgaccccagccgtcaatcgctgggacgccacccccggccaggcgcct
tccgagacgcccggccgcatctgggctggcggcgcggaggccacgcccgcgggccgctgg
gacgcggccgacggcgcggcgcagcccaagcgcaaccgctgggacgcgacgcccacgccc
ggccacggcggcggcgaggcgggccccggcgagacgccctccgcggccggcaagcgcagc
cggtgggacgccacgcccgccatggcggcgctgggggccacccccgcctacggcgccggc
gcgctgggcgccacgcccgcctggggggccggcatggcgacgcccgcgggcggcatgggc
atggagacgccgaccccgggcatgctggcggcacagcaggcggcgctgggcgcggtgccc
atgacaccagaggcctaccagcagctcaagattgagcgggagatggatgagcgcaacagg
cccctgagtgacgaggagctggatgcgatgctgcccggcgctgccgagggctacaagatc
ctgtcggagccggccggctacgagcccatccgcacgcccgcccgcaagctgatggccacg
cccacgccctttggcggcacgccgctgtaccagatacccgaggaggacagggcgcagaag
tttgatgtgccgcagcagctggagggcctgcccgagatgaagccggaggaccagcagtac
tttgggaagctgctcaaggatgtcgacgaggaggagctgactgtggaggaggccaaggag
cgcaagatcatgaagctactgctcaaggtcaagaacggcacgccgccgcagcgcaagtcg
gcgctgaggcagctcacagacaaggcgcgcgactttggcgcgggcccgctcttcaaccag
atcctgccgctgctgatgagccccacgctggaggaccaggagcgccacctgctggtcaag
gtcatcgaccgcgtgctgttcaagctggacgagttggtacggccgtactgccacaagata
ctggtggtcatcgagccgctgctgatcgacgaggactactatgctcgcgtggagggcagg
cacgtggtgtactgcgctgtacctgtactgcatcgtactgcactgcactggccggcactc
tgggagattatcgccaacctggccaaggctgcaggcctggccaccatgattgcggccatg
cgccccgacattgacaacgtcgacgagtatgtgcgcaacaccaccgcacgcgccttctcg
gtggtggcgtctgccctgggcatccccgcgctgctgcccttcctcaaggcggtgtgccag
tccaagaagagctggcaggcgcggcacacgggcatcaagattgtgcagcagattgccatc
ctcatgggctgcgccgtgctgccgcacctcaagtccctggtggacatcgtcaagcacggc
ctgcaggacgagaaccagaaggtgaagaccatcaccgcgctcaccattgcggcgctggca
gaggcgtcggctccctacggcatcgagagctttgatgatgtgctggagccgctgtggaag
ggcatccgcctgctgcgcggcaaggtgctggccgccttcctcaagtccatcggcttcatc
atccccctcatggacgccatgtacgccaactactacacgcgcgaggtcatgatcatcctc
atcagggagttccagacgccggacgaggagatgaagaagatcgtgctcaaggtggtgaag
cagtgcgtgggcaccgacggcgtggagccagactacatccgccaggagatcctgcccgag
ttcttcaagcacttctgggtgcggcgcatggcgctggaccgccgcaactaccgcgcgctg
gtggagacgacggtggaggtggcgggcaaggtggggtgctccgagattgtggggcgcgtg
gtggaggacctcaaggacgagagcgagccgtacaggaagatggtgatggagacgtgcgac
aaggtggtgcgcggcctgggggcggcggacatcgacgcgcgcctggaggagctgctgatc
gacggcatcctgtatgcctaccaggagcagcttgccgacgagtcgcccgtggtgctcaac
ggctttggcaccatcatcaacgccctgggccagcgcgccaagccctacctgccccagatc
tgcggtaccatcaagtggcggctgaacaacaagagcgccaagatccggcagcaggctgcc
gacctcatcagccgcatcgctcctgtgatgaagaaatgtgatgaggagaagctgctggcg
cacctgggggtggtactgtacgagaacctgggagaggagtatcccgaggtgctgggttcc
atcctgggcgccctcaagtccattgtggcggtgattggcatgacccgcatgacccccccc
atcaaggacctgctgccccgcctcacccccatcctcaagaacaggcacgagaaggtgcag
gagaactgcatcgacttggtggggcgcatcgccgaccgcggcgccgagtttgtacccgcc
cgcgagtggatgcgcatctgcttcgagctgctggacatgctcaaggcgcacaagaaggcc
atccggcgcgccacggtcaacacctttggctacatcgccaaggccatcggcccccaggac
gtgctggtcacactgctgaataacctcaaggtgcaagagcgccagaaccgcgtgtgcacc
acggtggccatcgccattgtggcggagacgtgcgcgcccttcaccgtgctgcctgcgctg
atgaacgaatacaaggtgcccgagctcaacgtgcagaacggcgtgctcaaggcgctttct
ttcctgtttgagtacattggggagatgggcaaggactacatctatgcggtgtccccgctg
ctggaggatgcgctgatggatcgcgacctggtgcaccgccagaccgcctgctccgtggtg
cagcacatgagcctgggggtggcggggcttgggtgcgaggacgcgctcacccacctgctc
aactacgtcttcccaaacatctttgagatcagcccccacatcatccagtcgacgacgggc
gccatagagggctgccgcgtggcgctgggccccgccgtgatcctcaactacctgctgcag
ggcctgtaccacccggcctgcaaggtgcgggaggtgtactggcggctgtacaacaacgtg
tacatcggggcgcaggatgcgctggtggcctgctacccgcgcatggaggacgagggcatc
aactcgtaccgccgccacgagatggacgtgtttgtgtga

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