Chlorella variabilis: CHLNCDRAFT_58222
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Entry
CHLNCDRAFT_58222 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
cvr
Chlorella variabilis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNase
TUDOR
ZSWIM1-3_RNaseH-like
MULE
Motif
Other DBs
NCBI-GeneID:
17353671
NCBI-ProteinID:
XP_005846407
JGI:
ChlNC64A_1_58222
UniProt:
E1ZIB1
LinkDB
All DBs
Position
Unknown
AA seq
1711 aa
AA seq
DB search
MLTNHLALLSPTGPATALPGPALRQLQQGGYRVGASVYDMTHRTSRGYGTISRRGEPCDD
GTPRWHVHWEHPREGQRDKAIAETYLELPLVHHKERVPPAGLGQRIQVVLGTHRPALGTI
VAKSGDGWTCELEGQKIRHNFKGAYLHAMGQPADGKTLQLSEAVELVTGLPLKEVYDWLS
DHQLNQAAPVDLRLVKPDSALLEEVFLGTRPVQGLADAEVRALHYAVPALEVAGQPGAGV
STATADDVGTIRSGLQKKAAGKWTLKYVCSHASKCSCPYTLELRHPAGSEVVSVWQTAPH
QFHDPTSADSQAQLRMHPRLEAMATVMIESGATPTSICTRLNNMVHDPADPLGLGGGTTG
LQHFSSARVSIIPRQIYVLIKKLRRAEGLGLTSDVQAMAALIDELRREGSVLFYQPYKQA
GRRSGEQPLVIVMQVSFQARMLDQFGRRLVFMDATFGVNKYGYPLYALVVQDESGRGVPV
SFMVCSSDTAEVVEHFLRTSMEGAQAAGDGTFKYKSIMIDKSKTEIAAVDQLVSTGHAEG
YLLCYFHFLQDWERFLSSGDAGVPKAERHRIMLALARLAHMQDQAPFKQELAFFILSNSQ
QHLPVAQRMHSSWVPCAEKWAWWGRLDVLDLQCNTNNLGERNFGLIKYTDLERRAQLTLH
ELLLALLTKTVPRNIQNRAHMLAGRVTSDQQQREQRAALWVQKLVERAMAWLRGVVKEVL
SGDTVVVAAAAKPGQLPGAEKRLTLSSVLAPKLGRRDGSTRDEPFAWQSREFLRKLCAGK
PCVFRVDYVLEQAGGKEFGSVFVNEKENAALSLVAQGWAKVRPPSDKQSPFYEELARAQA
DAEAKGLGVHTKDKDAAAAAVRDVLAADEFDTQGLLSRVGKGKPVSAIVEQVSSGSMLRV
TLLPELQSATVMVAGVQCPSMGRRPPPTAAPAAPAADGEEAAATGPAAGTAASLVAAGTS
APSEVQAEPFAREARYFTELRTLNREVKIVLEGVSQFGVLVGNVQFPPPAYAPAAPAAAA
ANGTPAAAAPAPEQDLATALIKAGLGRTAEWGLNMMTTGAFKLRELERAAKQAKVGMWHN
YVPQPGNSAKLSDKFTGIVSEIVSGDCLVVKDKASGEASIRAPRMGTRERAPEPWGPEAK
EFLRQRLIGKEVSVSMEYNRKVQPMMGEGAGRPGEERTMSFATVTVTEGAGGEQKVNNVA
ELLLVRGLAQVVKHRGDEERSGTLHAWAHYEDLMNAEVQGKSGKKGQWSSKEPPKPHVND
VSLPGTSSRAKQHLPFLQRAGKLAAVCEYVLSGHRIKLYIPKEGVTIAFNPSGVRCPQRG
QAAAAGRPAVEEEPYWEDALRFTRDNCLQRDCEVEVTSVDRVGNFQGTVRFGRLNLGVAL
LEAGLAKLHPSFDPYSTPGGKELEAAQAKARSQKLKVWDKDEPEAAAPAEEEGEGGSGAT
ANGGSAEREHFDVVVSDVTDANALYVQVAEEPRVTWVAEQLAGLSLEGAPPPAAPLKAGD
KCLAQSGADKQWYRAAVERAYVADPTAPKYDVLFMDFGNREHITAAQVRPMPPALAAVPG
QAQQACIAFVKAPGVEEEHGVEAAQFLWQLVGGNRRLTAYVERRERLVASGKHWGAQAPT
KLHLTLMEPGNEDYSRSVAGQLLSAGLARLVEPKGAQPGETGEVLEVLRSCQETARRRHV
GIYQYGDPGSGDEEDDGGFPALSKPGGRGKR
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaaatcatttagcactcttgtcaccgacagggccggccaccgccctccccggt
ccagcacttaggcaactgcaacagggcggttatcgcgtaggcgcctctgtctacgacatg
acccatcggacctcacgtggttacggcacaatcagcaggcgtggggagccttgtgacgat
ggcacaccgcggtggcatgtgcattgggagcacccacgcgaaggacaacgcgacaaagcc
atagctgagacgtacctggagctgccgctcgtgcaccacaaggagcgcgtcccgccagct
ggactaggtcagcggatccaggtggtgctgggcacacacaggcctgcactgggcacaatc
gttgcaaagagcggcgatgggtggacgtgcgagctggagggccagaagatccgtcacaac
ttcaaaggcgcctacctgcatgcaatggggcagccagctgatgggaagacgctgcagctg
tcagaggcggtggagcttgttaccggcctgcccctgaaagaggtgtatgactggctgtct
gatcaccagctcaaccaggccgcacctgtggatctgcgcctagtgaagcccgactcggcg
ctgctggaagaggtgttcctcggcacgcgtcctgtgcaagggcttgctgatgctgaggtg
cgggctctacactatgcagttccagccctcgaagttgctgggcagcccggtgctggtgtg
tcaacggcaacggctgatgatgttggcaccatccggagcggcctgcagaagaaagcggcg
ggcaagtggacgctcaagtatgtctgctcccatgcatccaagtgcagctgcccgtacacg
ctggagttgcggcatccggctggcagcgaggtggtgagcgtgtggcaaacagcgccccac
cagttccatgaccccaccagcgccgacagccaggcccagctccgcatgcacccccgcctg
gaggcgatggccaccgtgatgatcgagagtggcgccacgcccacgtccatctgcacacgg
ctgaacaacatggtgcatgatccggccgacccgctgggcctcgggggcgggactactggg
ctgcagcacttcagcagcgcccgtgttagcatcatcccgcggcagatctatgtgctgata
aagaagctgcggcgtgctgaaggcttgggcctcaccagcgacgtgcaggcgatggcggct
ctgattgatgagctgagaagggagggctctgtgctgttctaccagccctacaaacaggct
ggcaggcgcagcggggagcagccgctggtgattgtgatgcaagtgtccttccaggcgcgc
atgctggaccagtttgggcggcggctggtgttcatggacgccacgtttggcgtcaacaaa
tacggctacccactctacgcgttggtggtgcaagatgagagcgggcgcggggtgccggtc
agcttcatggtgtgcagctcggatacggcggaggtggtggagcacttcctgcgcacatcg
atggaaggggcacaggcggcaggggatggcaccttcaagtacaagtccatcatgatcgac
aagtcgaagacggagattgcagcggtggaccagctggtgtccaccgggcatgccgaagga
tacctgctctgctacttccacttcctgcaagattgggaacgcttcctcagcagcggcgac
gcgggtgtgcctaaggctgagcggcaccgcatcatgctggcgctggctcgcctagcccac
atgcaagaccaagcgccgttcaaacaagagctggccttcttcatcttgagcaacagccag
cagcacctcccggtggcgcagcgcatgcacagcagctgggtgccgtgcgccgagaagtgg
gcgtggtgggggcggctggacgtgctggacctgcagtgcaacacaaacaacctcggggag
cgcaattttggcctcatcaagtacaccgacctggagcgcagggcgcagctgacgctgcac
gagctgctgctggcgctgctgacaaagacagtgccccgcaacatccagaaccgcgcccac
atgctggcggggcgggtgaccagcgaccagcagcagcgcgagcaaagggcagcactgtgg
gtgcaaaagctggtggaacgcgctatggcgtggttacgtggagtggtcaaggaggtttta
tccggcgacacggtggtggtagcagcggcagccaagcccggccagttgccgggcgccgag
aagaggctcaccctctccagcgtgctggcacccaagctgggccgccgcgacggctccacc
cgcgacgagccctttgcctggcagtcccgcgagttcctgcgcaagctctgcgcgggcaag
ccctgcgtgttccgcgtggactatgtgctggagcaggcggggggcaaggagtttggcagc
gtgtttgtgaacgagaaggagaacgcggcactgagcctggtggcgcagggctgggccaag
gtgcggccgcccagcgacaagcagagcccgttctatgaggagctggccagggcgcaggcg
gatgcagaggccaaggggctgggggtgcacacaaaggacaaggatgcggcagcagcggcc
gtgcgtgacgtcctcgcagctgacgagtttgatacccagggcctgctgtcgcgtgtgggc
aagggcaagccggtgtcggccatcgtggagcaggtcagcagcggcagcatgctgcgcgtc
acgctgctgccggagctgcagagcgcgacggtgatggtggcgggcgtgcagtgccccagc
atgggccgccgaccgccgcccactgcggccccagccgcgcctgcggctgacggagaagag
gcagccgccacggggcctgccgccggcactgcggcatcgctggtggcggcaggcacctca
gcgccctcggaggtgcaggcggagccgtttgcgcgggaggcgcgctatttcacagagctt
cgcactctgaaccgggaagtcaagatcgtgctggagggcgtcagccagtttggtgtgctc
gtgggcaacgtgcagttcccgccgcccgcctacgctccggcagcgcccgcggccgccgcc
gccaacggcacgcctgccgcggcggcgccggccccggagcaggacctggccacagccctg
atcaaggcggggctgggccgcacagcggagtggggcctcaacatgatgactacaggcgcc
ttcaagctgcgcgagctggagcgggcggccaagcaggccaaggtgggcatgtggcacaac
tatgtgccccagcccgggaactccgctaagctcagcgacaagttcaccggcatcgtgtct
gagattgtgtctggcgactgcctggtggtgaaggacaaggcgtcaggtgaggcaagcatc
cgcgcgccgcgcatgggcacgcgggagcgcgccccggagccctggggcccagaggccaag
gagttcctcaggcagcggctgattggcaaggaggtgtctgtgagcatggagtacaaccgc
aaggtgcagcccatgatgggggagggcgcggggcggcccggagaggagcgcaccatgtcg
ttcgccacagtcaccgtcaccgagggcgccggcggcgagcagaaggtcaacaatgtggcg
gagctgctgctggtgcgcggcctggcgcaggtggtgaagcaccgcggcgacgaggagcgg
tcaggcacgttgcatgcttgggcgcactacgaggacctgatgaatgccgaggtgcagggc
aagtctgggaagaaggggcagtggagcagcaaggagccgcccaagccacacgtcaacgac
gtctcgctgccgggcacctcgtccagggccaagcagcacctgcccttcctgcagcgcgcg
ggcaagctggcggcggtctgcgagtatgtgctgagcgggcaccgcatcaagctgtacatc
cccaaggagggcgtcaccattgccttcaaccccagcggcgtgcgctgcccgcagcgtggc
caggccgcggcggcagggcgccccgcagtggaggaggagccgtactgggaggatgcgctg
cggttcacacgcgacaactgcctgcagcgcgactgcgaggtggaggtgaccagcgtggac
cgggtcggcaacttccagggcaccgtgcgcttcgggcggctcaacctgggagtggcgctg
ctggaggccggcctggccaagctgcacccctccttcgacccctactccacgcccggcggc
aaggagctggaggcggcgcaggccaaggcccgcagccagaagctcaaggtgtgggacaag
gacgagcccgaggcggcagcgcccgcggaggaggaaggggagggcggcagcggcgcgacg
gccaacggcggctccgctgagcgcgagcactttgatgtggtggtgtcagatgtcacagac
gccaacgcgctctacgtccaggtggccgaggagccgcgcgtgacctgggtggcagagcag
ctggcggggctgtcgctggagggggcgccgccgccggcggcgccgctcaaggccggggac
aagtgcctggcacagagcggtgcggacaagcagtggtaccgcgccgccgtggagcgcgcc
tacgtggcagacccgaccgctcccaagtatgacgttctgttcatggactttggcaaccgg
gagcacatcacagcagcgcaggtgcggccgatgcctccggcgctggcggcggtgcccggc
caggcgcagcaggcctgcatcgcctttgtcaaggccccgggggtggaggaggagcacggt
gtggaggccgcccagttcctgtggcagctggtgggaggcaaccggcgcctgacggcgtac
gtggagcgccgcgagcggctggtggccagcggcaagcactggggcgcgcaggcccccacc
aagctgcacctcacgctgatggagcccggcaacgaggactacagccgcagcgtggccggc
cagctgctgtcggcgggcctggctcggctggtggagcccaagggcgcgcagcctggcgag
acgggcgaggtgctggaggtgctgcgctcgtgccaggagacggcgcggcggcgccacgtc
ggcatctaccaatacggcgaccccggcagcggcgacgaggaggacgacggcggcttcccc
gcgttgagcaagcccggcgggcgcggcaagcgctga
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integrated database retrieval system