Corynebacterium vitaeruminis: B843_02105
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Entry
B843_02105 CDS
T03042
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cvt
Corynebacterium vitaeruminis
Pathway
cvt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cvt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B843_02105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvt03021
]
B843_02105
03400 DNA repair and recombination proteins [BR:
cvt03400
]
B843_02105
Enzymes [BR:
cvt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B843_02105
Transcription machinery [BR:
cvt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B843_02105
DNA repair and recombination proteins [BR:
cvt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B843_02105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AHI21813
UniProt:
W5Y5N7
LinkDB
All DBs
Position
432588..436595
Genome browser
AA seq
1335 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
QCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEADAESEIAERAQKLEED
LAELEAAGAKADARRKVQNAADKEMQHIRERAEREVARLEEIWQTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELRQIINEGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKRADEFGGQ
GAYEPATENGPAKGVYSSYAEAIMAYDRGVLGLQAQIKVRISHLRPPADIEAEYFPDGWE
QGQTWLATTSLGRVMFNELLPWNYPYLEGVMVRKGGGSDKIMLGDVINDLAAKYPMITVA
QTMDKMKDAGFYWATRSGVTITMSDVLVLPNKEEILERYESEARKIERKFWEQGALTERE
RYDRLVELWKDATDTVGKAVEALYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRLGIRVPVAVPVKDAEGNVTGYRAHELIETTVSGRVAATDVKSGDEVLVAAGENLT
DALIDKLVEAGVEQIKVRSVLTCQTPTGVCAKCYGKSMASGKLVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVHLDDEGNFYTLT
ITPDDGSDNVVYEKLSKRQGLATVRVPMETNPGAFIERTLREGDHVGVGDRLLRGPADPH
DVLEVLGRRGVEQHLVDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGT
LVDLSEAKAANAEAIAAGGSPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNIAVKPTEAARNAAYSIPTYGDSIYGDDGYG
EFTGASVPLDEAFDL
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccgcatcggcctggccaccgccgacgacatc
cgccgttggtccaagggcgaggtcaagaagccggagaccattaactaccgcacgctcaag
cctgagaaggacggcctgttctgcgagcgcatcttcggtcccacccgcgactgggagtgc
cagtgtggtaagtacaagcgcgtgcgctacaagggcatcatctgtgagcgctgtggcgtt
gaggtgaccaagtccaaggtgcgccgcgagcgcatgggccacattgagctggccgcgccg
gtcacccacatctggtacttcaagggcgttccttcccgcctgggctaccttctggacctg
gctccgaaggacctggagcgcatcatctacttcgccgccaacatcatcaccagcgttgat
gaggaggcccgccacaacgaccagtccaccctggaggcagagatgcttctggagaagaag
gacgtggaggccgacgcagagtctgagatcgccgagcgcgctcagaagctggaggaggac
ctggctgagctcgaggctgccggcgccaaggccgacgcacgccgcaaggttcagaacgct
gccgacaaggagatgcagcacatccgcgagcgcgccgagcgcgaggtcgcgcgcctagag
gagatctggcagaccttcatcaagctcgccccgaagcagatgatcatcgacgagaccatc
tacgaggagctcgtcgaccgctacgaggattacttcaccggcggcatgggcgcagaggcc
atccagaccctcatccgcaacttcgacctcgacgccgaggccgaggagctgcgccagatc
atcaacgagggcaagggccagaagaagatgcgtgccctcaagcgcctgaaggtcgtcgcg
gccttccagcgctccggcaacgatccggctggcatggtgctcgactgcatcccggtcatc
ccgccggagctgcgcccgatggttcagctcgacggtggccgcttcgccaccagtgacctg
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcttgaagcgcatgatcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtggacgcc
ctgttcgacaacggccgccgcggccgcccggtcaccggtcctggtaaccgcccgctgaag
tccctgagcgacctgctcaagggcaagcagggtcgtttccgccagaacctgctgggtaag
cgcgtcgactactccggtcgttcggttattatcgtcggcccgcagctcaagctgcacgag
tgtggtctgccgaagctcatggcgctcgagctgttcaagccgttcgtcatgaagcgcctg
gtcgagaacgactacgcgcagaacatcaagtccgccaagcgcatggtcgagcgccagcgc
cccgaggtgtgggacgtgctcgaagaggccatcgccgagcacccggtgatgctcaaccgc
gcaccgaccctgcaccgcctgggcatccaggccttcgagccgaagctcatcgagggcaag
gcaatccagctgcacccgctggcgtgcgaggccttcaacgccgacttcgacggtgaccag
atggcagtccacctgccgctgagcgccgaggcgcaggccgaggcccgcattctcatgctc
gcctcgaacaacatcctgtccccggcctccggcaagccgctggccatgccgcgtctggac
atggtcacgggcctgtactacctgaccatggacaagcgcgccgacgagttcggcggccag
ggcgcctacgagccggccaccgagaacggcccggccaagggcgtgtactcctcctacgcg
gaggccatcatggcctacgaccggggcgtgctcggcctgcaggcgcagatcaaggtgcgc
atctcgcacctgcgtccgccggcagacatcgaggcggagtacttcccggacggctgggag
cagggccagacctggcttgctactacctctctgggtcgcgtgatgttcaacgagctgctg
ccgtggaactacccgtacctcgagggcgtcatggtccgtaagggcggcggctccgacaag
atcatgctcggcgacgtcatcaacgacctcgcggcgaagtacccgatgatcaccgtggct
cagaccatggacaagatgaaggacgccggcttctactgggcaacccgttccggcgtgacc
atcaccatgtccgacgtgctcgtgcttccgaacaaggaagagatcctcgagcgctacgag
tccgaggcgcgcaagatcgagcgcaagttctgggagcagggtgctctcaccgagcgcgag
cgctacgaccgcctggtcgagctgtggaaggacgccaccgacaccgtgggtaaggccgtc
gaggccctgtacccggatgacaacccgatcccgatgatcgtgaagtccggcgccgccggt
aatatgcgtcagatctggaccctggccggcatgaagggcatggtcgtgaactcgaagggt
gactacatcacccgcccgatcaagacctccttccgcgagggcctgtcggtgctcgagtac
ttcaacaactcgcacggctcccgtaagggcctggccgataccgctctgcgtaccgccgac
tcgggctacctcacccgtcgtctggtcgacgtcgcgcaggacgtcatcgtccgcgaggag
gactgtggcacccgcctgggcatccgcgttccggtcgccgtgccggtcaaggacgccgag
ggcaacgtcaccggctaccgcgcgcacgagctcatcgagaccaccgtctccggccgcgtc
gccgccaccgacgtcaagtcgggcgacgaggttctggtcgccgccggtgagaacctcacc
gacgcgctcatcgacaagctggtcgaggccggcgtcgagcagatcaaggtccgctccgtg
ctcacctgccagaccccgaccggtgtctgcgcgaagtgctacggcaagtccatggcctcc
ggcaagctcgtcgacatcggcgaggccgtcggcatcgtggccgcgcagtccattggtgag
cctggtacccagctgaccatgcgtacgttccaccagggtggtgtcggtggcgacatcacc
ggtggtctgccgcgtgtccaggagctgttcgaggcccgcgttccgaagaaccgcgccccg
atcgcttccgtcgccggcaccgtccacctcgacgacgagggcaacttctacaccctgacc
atcaccccggacgacggttcggacaacgtggtctacgagaagctgtccaagcgccagggc
ctggctacggtccgcgtgccgatggagaccaacccgggcgcgttcatcgagcgcaccctc
cgcgagggcgaccacgtgggcgtcggcgaccgactcctgcgcggcccggctgacccgcac
gacgtgctcgaggttctcggccgacgcggtgtggagcagcacctcgtcgacgaggtccag
gccgtctaccgtgcacagggtgtggccatccacgacaagcacatcgagatcatcatccgc
cagatgctgcgtcgcggcaccgtcatcgagtccggttccaccgagttcctgccgggtacc
ctggtcgatctctccgaggccaaggcggccaacgccgaggccattgccgccggcggcagc
cccgccgagctgcgcagcgagatcatgggtatcaccaaggcctcgctggctaccgagtcc
tggctgtcggcggcctccttccaggagaccacccgcgtgctcacggacgccgcgatcaac
aagcgctccgacaagctcatcggcctgaaggagaacgtgatcatcggtaagctgatcccg
gccggtaccggtatctcccgctaccgcaacatcgccgtcaagccgaccgaggcggcccgc
aacgcggcctactcgatcccgacctacggcgactccatctacggcgacgacggctacggt
gagttcaccggcgcctccgtcccgctggacgaggccttcgacctctag
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