Crocosphaera watsonii: CwatDRAFT_1236
Help
Entry
CwatDRAFT_1236 CDS
T05097
Name
(GenBank) Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70 region 1.2
KO
K03086
RNA polymerase primary sigma factor
Organism
cwa
Crocosphaera watsonii
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CwatDRAFT_1236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cwa03021
]
CwatDRAFT_1236
Transcription machinery [BR:
cwa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CwatDRAFT_1236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF5089
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
EAM48424
UniProt:
Q4BWZ3
LinkDB
All DBs
Position
complement(1784..2908)
AA seq
374 aa
AA seq
DB search
MNTTEMMQTESTNEFVPAQMEAEGLEQTDKELQSVEVELSSLSDELGNQYPEGYRKTVSD
DTVGAFFKEMSRYPLLNAEEEVELAQQVQFLLEVEETKQRLKEELQRTPSKAECAEALGF
ETAKQFEHRLHKGRIAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAIGLNRAAEKF
DPNKGYKFSTYAYWWIRQAITRTIANDARTIRLPIHVVEKLNKLKKAQRVLKQKLQRNPN
EKELADELEVTPPQLRQLLQLRRQSLSLNHRVGKGEDTELVDLLEDQDLQLPEELMNEGM
LQYEVSAVLSDVLTQREKDVISLRYGLCTSQPHTLEEVGGIFNLSRERVRQIQSKAMRKL
RRPQVARRLKGWLH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgacagaaatgatgcaaacggaatcgaccaatgaatttgtacctgctcaaatg
gaagcagaaggactcgaacaaacagacaaagaattacaatctgttgaggtggaactttct
tctttatccgatgaattaggtaatcagtatccagagggatatcggaaaaccgtttctgat
gacactgtgggggcatttttcaaggaaatgtctcgctatcctttgttaaacgccgaagaa
gaggtagaactagcccaacaggttcaatttttattggaggtagaagaaactaaacaacga
ttaaaagaagagttacaacgtaccccaagcaaagcagaatgcgccgaggctttgggtttt
gagacggcaaagcaatttgagcatcgtttacataaggggcgaattgctaagcggaaaatg
attcgttctaatttgcgtttggtggtgtctattgccaaacgttatcttaatcggggtgtt
cctttcctagatttaattcaagagggggcgatcggacttaatcgcgcggcggagaaattt
gatcccaataagggttataaattttctacttatgcttattggtggattcgtcaagctatc
actcgaaccattgctaatgatgcgagaaccattcgtttaccgatccatgttgtagaaaaa
ttaaacaaactgaaaaaagctcaacgagttcttaaacaaaaattacaacgtaaccccaac
gaaaaagaattagctgatgagttagaagtaactcccccccaactgcgtcagttattgcag
ctacggagacagtctttatctttgaatcatcgggtgggtaaaggagaagacacggagtta
gttgatttactggaagatcaagacttacaacttcctgaagagttgatgaacgaaggaatg
ttacagtacgaagtttcagcagtgttgagtgatgttttgacccaacgagaaaaggatgtt
atttctttacgttatgggttatgtacatctcaaccccatacgttagaagaagtaggaggt
atttttaatttatcccgtgaacgagttcgtcagattcaaagcaaagctatgcgtaagtta
cgtcggcctcaagttgcccgtcgtctcaaaggatggctacattga
DBGET
integrated database retrieval system
