Crocosphaera watsonii: CwatDRAFT_1739
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Entry
CwatDRAFT_1739 CDS
T05097
Name
(GenBank) Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70 region 1.2
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cwa
Crocosphaera watsonii
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cwa03021
]
CwatDRAFT_1739
Transcription machinery [BR:
cwa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CwatDRAFT_1739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_20
HTH_5
DUF2316
HTH_25
Motif
Other DBs
NCBI-ProteinID:
EAM48905
UniProt:
Q4BYC5
LinkDB
All DBs
Position
10656..11642
AA seq
328 aa
AA seq
DB search
MPTANVNTKTKQPMYSADMVRTYLHEIGRVPLLTHEQEIIYGKQVQKMMNFLEKKEELAD
KLGKEPTVKEWSKELEIEQKALNQALEQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGSLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQSRTIRLPIHITEKLNKI
KKTQRELSQTLGRSATPSEIAQELEIEPSQIREFLSIARQPISLDVRVGDNQDTELSELL
EDQGVSPDLYITQELLRQDLRNLMAELTPQQRTVLTLRFGLEDGKELSLAKIGKRMNISR
ERVRQLEHQALAQLRRRRANVKEYLAAS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgctaacgttaacaccaaaaccaaacagcctatgtattcagcagatatggta
cggacttatctgcatgagattgggcgagtacctctgttaacccatgaacaagaaattatt
tatgggaaacaagtccagaaaatgatgaattttttggagaagaaagaggaactagcagac
aagttaggcaaagaacccacagtcaaagaatggtctaaagagctagaaatagagcaaaaa
gctcttaatcaagccctggaacagggtgaaagggctaaaagaaagatgattgaagcgaat
ttgcgcctagtggttgccattgccaagaaatatcaaaagcgcaatatggaattcctcgat
ctcattcaagaaggaagtctagggttggaaagaggtgtggagaaatttgaccccaccaag
gggtataagttttctacttatgcttactggtggattcgccaagccatcacacgggccatc
gctcaacagtcccgtaccatccgcttaccgattcatattacagaaaaactcaacaaaatc
aaaaaaacccagagggaactctctcaaaccctggggagaagtgcgacaccatcggaaatt
gcccaagaattagaaattgaaccctcacaaattcgggagtttcttagtattgcccgtcaa
cccatctcattagatgtgagagtgggagataatcaagacacggaactttcagaattatta
gaagatcaaggggtatctcctgatctgtatattactcaagaattattgcgtcaggacttg
aggaatctaatggctgaattaaccccccaacaaagaactgtcttgacgctacgttttggt
ttagaagatggcaaggaactatctttggctaaaattggcaaacgaatgaacattagccgt
gaacgggttcgtcaactagaacatcaagctttagcccaactacggagaagacgggctaac
gtgaaggaatatttagctgctagttag
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