KEGG   Crocosphaera watsonii: CwatDRAFT_2612
Entry
CwatDRAFT_2612    CDS       T05097                                 
Name
(GenBank) RecJ exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cwa  Crocosphaera watsonii
Pathway
cwa03410  Base excision repair
cwa03430  Mismatch repair
cwa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cwa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CwatDRAFT_2612
   03430 Mismatch repair
    CwatDRAFT_2612
   03440 Homologous recombination
    CwatDRAFT_2612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cwa03400]
    CwatDRAFT_2612
DNA repair and recombination proteins [BR:cwa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CwatDRAFT_2612
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CwatDRAFT_2612
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CwatDRAFT_2612
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 Toprim
Other DBs
NCBI-ProteinID: EAM49726
UniProt: Q4C0P1
LinkDB
Position
complement(13810..15774)
AA seq 654 aa
MKLPDQRWYIASPNPDQVKKLVAETGLSPLLAQVILNRGIDSPQLAQVYINPETENLPDP
LTEFPDLFPSIELLKEAIETGEKIAICGDYDADGMTSTSLLLRAFNHFGGDAYYEIPSRM
KDGYGINERIVEKFAEEGVGVVLTVDNGISAYNPIKLAVELGLTVIITDHHDLPEKLPPA
DAILNPKLLPIQSPYRGLAGVGVAYILAVTLAEALQKSDGIIDSLLELFTLGTIADLAPL
VGVNRRWLKKGLKQLPNSQLVGIQALMQVAGVSEEQKQLKPDDIGFKLGPRINAVGRIGD
PETAIELLITDDPAIALERAMQCEQINSQRKSLCEEIEQEAIHLIRTTPIDYKRDRVLVV
VHPQWHHGVIGIVASRLVERYGVPVFIGTYEEADYSKIRGSARGIEEFNIFESLVYCYDL
LGKYGGHKAAGGFGLGSDNLIAFQERLSQFAHQLLEPHHLKPLVKIDGQADFKQLKTQLY
ENIDSLQPWGIQNAFPVFWTPNVKILEQRTVGKNHLKLVLGQDDGQEIKAIAWRFGSYFP
LPKCLDIAYKLTENNWNGAVNIELEIVGVRLPAGATIKPHNSFTYQGKDYICYYSEKEQE
LKIKNSQGKVLAIRKGQRKGLLGINRQEAQEIDVTKKPYYDIIRAAMNSLNLTK
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgaaattaccagatcaacgatggtacattgcctctcctaacccagatcaagtcaaaaaa
ttggtagcagaaacgggactatcccctttacttgctcaggtgatcttaaatcgaggtatc
gatagtccccagttagctcaagtttatattaaccccgagacggaaaacttgcccgatcct
ttaacagaatttcccgatttatttcccagtattgaactgttaaaagaagccattgaaaca
ggggaaaaaattgctatttgtggggactatgacgctgacggaatgactagcacttctcta
ttattacgagctttcaatcatttcggaggggacgcttattatgaaattcctagtcgtatg
aaagatggctatgggattaacgaaagaattgtggaaaagtttgctgaagagggagtaggg
gttgtcttaaccgttgataatggcatttctgcttataatcccattaagttagctgtagaa
ttagggttaacagttattattactgatcatcatgatttaccagaaaagttaccccctgct
gatgctattttaaaccccaaattattaccgattcaatccccttatcggggtttagctggt
gtgggagttgcttatattttagcggtaactcttgctgaagcattacagaaaagtgatgga
attattgattctttattagaattatttaccttgggaacaattgcagatttagctccctta
gtcggggttaatcgtcgttggttaaaaaagggattaaaacagttaccaaattcacagtta
gtaggaattcaagccttaatgcaagtagcaggggttagtgaagaacaaaaacagttaaaa
cccgatgatattggttttaaattgggaccaagaattaatgcagtgggacgaattggtgat
ccagaaactgctattgaattattaataaccgatgacccagcaatagctttagaaagggct
atgcaatgcgaacaaatcaatagtcaaagaaaaagtctgtgtgaagaaatagaacaggaa
gcaatacatttaatcagaacaactcctattgattacaaaagagatagggttttagttgtt
gttcatcctcaatggcatcacggagttattggtatcgttgcttctcgtttggttgaacgt
tacggagttcctgtttttattggtacttatgaagaagcagattacagtaaaattaggggt
tcagctagaggtattgaagaatttaatatctttgaatccttagtgtattgttatgattta
ttgggaaaatacgggggacataaagcggcagggggattcggtttagggagtgataattta
attgcttttcaggaaagattgagtcaatttgcccatcaattactagaaccccatcacctt
aaacctttagtaaaaatcgatggacaagcagattttaaacagttaaaaactcagttatat
gagaatatcgatagtttacaaccttggggtatacaaaatgcctttcctgtgttttggact
ccgaatgtaaaaatattggaacaaagaaccgtggggaaaaatcatctaaagttagtatta
ggtcaagatgatggtcaagaaataaaagcgatcgcctggcggtttggttcctactttcct
ctaccaaaatgcttagatattgcctataagttaacagagaataactggaacggtgctgtt
aatatagaattagaaatagtcggggtccgtttacctgctggtgcaacaatcaaacctcac
aacagtttcacttatcaagggaaagattatatttgttattattcagaaaaagaacaagaa
ctaaaaataaaaaattctcagggtaaagtgttagccattcgcaaaggacaaagaaaagga
ctattaggaataaatcgccaagaagctcaagaaatagatgtcactaaaaagccttactat
gatataataagagcggcaatgaatagcttaaatttaacaaaataa

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