Crocosphaera watsonii: CwatDRAFT_2612
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Entry
CwatDRAFT_2612 CDS
T05097
Name
(GenBank) RecJ exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cwa
Crocosphaera watsonii
Pathway
cwa03410
Base excision repair
cwa03430
Mismatch repair
cwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CwatDRAFT_2612
03430 Mismatch repair
CwatDRAFT_2612
03440 Homologous recombination
CwatDRAFT_2612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cwa03400
]
CwatDRAFT_2612
DNA repair and recombination proteins [BR:
cwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CwatDRAFT_2612
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CwatDRAFT_2612
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CwatDRAFT_2612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
EAM49726
UniProt:
Q4C0P1
LinkDB
All DBs
Position
complement(13810..15774)
AA seq
654 aa
AA seq
DB search
MKLPDQRWYIASPNPDQVKKLVAETGLSPLLAQVILNRGIDSPQLAQVYINPETENLPDP
LTEFPDLFPSIELLKEAIETGEKIAICGDYDADGMTSTSLLLRAFNHFGGDAYYEIPSRM
KDGYGINERIVEKFAEEGVGVVLTVDNGISAYNPIKLAVELGLTVIITDHHDLPEKLPPA
DAILNPKLLPIQSPYRGLAGVGVAYILAVTLAEALQKSDGIIDSLLELFTLGTIADLAPL
VGVNRRWLKKGLKQLPNSQLVGIQALMQVAGVSEEQKQLKPDDIGFKLGPRINAVGRIGD
PETAIELLITDDPAIALERAMQCEQINSQRKSLCEEIEQEAIHLIRTTPIDYKRDRVLVV
VHPQWHHGVIGIVASRLVERYGVPVFIGTYEEADYSKIRGSARGIEEFNIFESLVYCYDL
LGKYGGHKAAGGFGLGSDNLIAFQERLSQFAHQLLEPHHLKPLVKIDGQADFKQLKTQLY
ENIDSLQPWGIQNAFPVFWTPNVKILEQRTVGKNHLKLVLGQDDGQEIKAIAWRFGSYFP
LPKCLDIAYKLTENNWNGAVNIELEIVGVRLPAGATIKPHNSFTYQGKDYICYYSEKEQE
LKIKNSQGKVLAIRKGQRKGLLGINRQEAQEIDVTKKPYYDIIRAAMNSLNLTK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaccagatcaacgatggtacattgcctctcctaacccagatcaagtcaaaaaa
ttggtagcagaaacgggactatcccctttacttgctcaggtgatcttaaatcgaggtatc
gatagtccccagttagctcaagtttatattaaccccgagacggaaaacttgcccgatcct
ttaacagaatttcccgatttatttcccagtattgaactgttaaaagaagccattgaaaca
ggggaaaaaattgctatttgtggggactatgacgctgacggaatgactagcacttctcta
ttattacgagctttcaatcatttcggaggggacgcttattatgaaattcctagtcgtatg
aaagatggctatgggattaacgaaagaattgtggaaaagtttgctgaagagggagtaggg
gttgtcttaaccgttgataatggcatttctgcttataatcccattaagttagctgtagaa
ttagggttaacagttattattactgatcatcatgatttaccagaaaagttaccccctgct
gatgctattttaaaccccaaattattaccgattcaatccccttatcggggtttagctggt
gtgggagttgcttatattttagcggtaactcttgctgaagcattacagaaaagtgatgga
attattgattctttattagaattatttaccttgggaacaattgcagatttagctccctta
gtcggggttaatcgtcgttggttaaaaaagggattaaaacagttaccaaattcacagtta
gtaggaattcaagccttaatgcaagtagcaggggttagtgaagaacaaaaacagttaaaa
cccgatgatattggttttaaattgggaccaagaattaatgcagtgggacgaattggtgat
ccagaaactgctattgaattattaataaccgatgacccagcaatagctttagaaagggct
atgcaatgcgaacaaatcaatagtcaaagaaaaagtctgtgtgaagaaatagaacaggaa
gcaatacatttaatcagaacaactcctattgattacaaaagagatagggttttagttgtt
gttcatcctcaatggcatcacggagttattggtatcgttgcttctcgtttggttgaacgt
tacggagttcctgtttttattggtacttatgaagaagcagattacagtaaaattaggggt
tcagctagaggtattgaagaatttaatatctttgaatccttagtgtattgttatgattta
ttgggaaaatacgggggacataaagcggcagggggattcggtttagggagtgataattta
attgcttttcaggaaagattgagtcaatttgcccatcaattactagaaccccatcacctt
aaacctttagtaaaaatcgatggacaagcagattttaaacagttaaaaactcagttatat
gagaatatcgatagtttacaaccttggggtatacaaaatgcctttcctgtgttttggact
ccgaatgtaaaaatattggaacaaagaaccgtggggaaaaatcatctaaagttagtatta
ggtcaagatgatggtcaagaaataaaagcgatcgcctggcggtttggttcctactttcct
ctaccaaaatgcttagatattgcctataagttaacagagaataactggaacggtgctgtt
aatatagaattagaaatagtcggggtccgtttacctgctggtgcaacaatcaaacctcac
aacagtttcacttatcaagggaaagattatatttgttattattcagaaaaagaacaagaa
ctaaaaataaaaaattctcagggtaaagtgttagccattcgcaaaggacaaagaaaagga
ctattaggaataaatcgccaagaagctcaagaaatagatgtcactaaaaagccttactat
gatataataagagcggcaatgaatagcttaaatttaacaaaataa
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