Conexibacter woesei: Cwoe_2960
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Entry
Cwoe_2960 CDS
T01153
Name
(GenBank) DNA repair exonuclease, SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cwo
Conexibacter woesei
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cwo03400
]
Cwoe_2960
DNA repair and recombination proteins [BR:
cwo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cwoe_2960
Archaeal homologous recombinant proteins
Cwoe_2960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
TsaE
ABC_tran
AAA_22
NACHT
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ADB51379
UniProt:
D3FBW4
LinkDB
All DBs
Position
complement(3163481..3167056)
Genome browser
AA seq
1191 aa
AA seq
DB search
MRLHRLRVTAFQAFAATEEIDFDALAAAGLFLLHGDTGAGKTTLLDAVCFALYGDVPGAR
SRDSRLRSDHADPGVRTEVELDVTLRDRRFRIIRRPKQVRPKLRGDGITEEAAACTVQEL
RDDEWVTIAARPDEARAELSDPLGMTCDQFCQVVLLPQGEFAAFLRAGSDERWRLLERLF
GTERFAAVEWWLRDRRRAARAELEQQLRDVRDVVSRISQVAGEPAPDGWEDELESVREWT
GGLGITTEASAATAEEANAGARAARVAAERAFADGSELAGRRTRLAKALSELESWRSRRG
ARDAAEQELLAARRAAPVAALLETARARGADAATAAADAEAAWSALDDESRAAADAAAEA
VAAAPPAPAAEPWSIAVAQPQQSTAPPEHEVFTLFDLPPLETEERGAAAGPGDDAERAAG
AESAAAAEPGAAAEPGTDAEPGTAAEPGTDAEPGTAAEPGTDAEPGTDAEPAAPGASDGE
PRPAALRAHAAELRTRAGALGALVAVEQRLATDEQSLATLAQEAERAGATLAASAQALEQ
AGQERRRLDETLQAARRAADRVEALAAESRGAAERAERATERDRLVAAGDAIADRVRAAV
DAHQSAHAAWLDLRERRLAGMAAELAADLTPGDPCAVCGSPDHPAPAHLAGAAATPSADA
ASDASTAGASDAAAHGANAADAAHSARVANADGASLAEQERAAQERQAVLAEERSGCERQ
AAAHAEALAAARAVAGDAPAEELGDRARRLASELSAARTLADGLAGTERALDALATTTAA
QEQRRREAEQTVTTARAAHAERSAALAADRAQVAEARGDADSIADRADSLRGTADACETA
AAALEHAARTAAAHVAAADAAERAALDAGFTPDDAAPLAPPAADAGLIAALDSHAAPIAT
PAADAARAAMREGDTQEQLERRLREFDEGLAQRVALIQDEQLQAAAAEPAPDLDVLREQA
AAAARADEAAHGRLTVDRRRHVDVIRLAADLDGALERLAPVAEQARLVTEVSYLVEGRSS
SNRLRMRLAAYVLAARLEEVAEAATARLERMSNGRYAIVHSDGGGKGQRRGGLDLRILDG
WTGEERSPATLSGGETFLASLALALGLADVVAADAGGSRLETLFIDEGFGSLDERTLDEV
LDVLDALREGGRAVGIVSHVAELRQRVPAKLHVVKGRSGSHVEQSAATAAA
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcaccggctccgcgtcaccgccttccaggcgttcgccgcgaccgaggagatc
gacttcgacgcgctcgccgccgccgggctgttcctgctgcacggcgacaccggcgcgggc
aagacgacgctgctcgacgccgtctgcttcgcgctctacggcgacgtcccgggcgcccgc
tcgcgcgattcgcgcctgcgctcggaccacgccgaccccggcgtcagaaccgaggtcgag
ctggacgtgacgctgcgcgaccgccgcttccggatcatccggcggccgaagcaggtgcgc
ccgaagctgcgcggtgacggcatcacggaggaggcggccgcctgcacggtgcaggagctg
cgcgacgacgagtgggtgacgatcgccgcgcgcccggacgaggcgagagcggagctgtcg
gacccgctcggcatgacgtgcgaccagttctgccaggtcgtcctgctcccgcagggcgag
ttcgccgcgttcctgcgagcgggcagcgacgagcgctggagactgctggagcggctgttc
gggaccgagcgcttcgccgccgtcgagtggtggctgagagatcgccgcagggccgcgcgc
gccgagctggagcagcagctgcgcgacgtgcgcgacgtcgtctcccgcatctcgcaggtc
gccggcgagccggcgcccgacggctgggaggacgagctggagagcgtgcgggagtggacc
ggcgggctcggtatcacgaccgaagcgagcgccgcgacggccgaggaagcgaacgcgggc
gcccgcgcggcacgtgtcgcggccgagcgcgccttcgcggacggcagcgagctggccggc
cgccgcacgcggctcgcgaaggcgctgtcggagctggagtcgtggcgcagccggcgcggc
gcccgcgacgcggccgagcaggagctgctcgccgctcgccgcgccgcccccgtcgccgcg
ctgctggagaccgcgcgcgcccgcggcgccgacgcggccacagccgcggcggatgccgaa
gcagcgtggtcggcgctcgacgacgagtcgcgtgccgccgccgacgccgcggccgaggcc
gtcgcggccgcgccacccgcgcccgccgcggagccgtggtcgattgcggtcgctcaaccg
cagcaatcgaccgcgcctcccgagcacgaggtgttcaccctcttcgacctcccgccactg
gagacagaggagcgtggcgcggcggccgggccaggcgacgacgcggagcgggcagctggc
gcggagtcggcggcggccgcggagccgggggcggccgcggagccggggacggacgcggag
ccggggacggccgcggagccggggacggacgcggagccggggacggccgcggagccgggg
acggacgcggagccggggacggacgcggagccggcggcaccgggggcgagcgacggggag
ccgcggccggctgcgctgcgcgcgcacgcggccgagctgcgcacgcgcgcgggagcgctc
ggcgcgcttgtcgcggtcgagcagcggctggcgaccgacgagcagtcgctcgcgacgctc
gcgcaggaggccgagcgggccggcgcgaccctcgccgcgtcggcgcaggcgctggagcag
gccgggcaggagcggaggaggctggacgagacactgcaggccgcacgccgcgctgccgac
cgcgtcgaagcgctcgccgccgagtcacgcggcgccgccgagcgcgccgaacgcgcgacc
gagcgcgaccgtctggtcgcggccggcgacgcgatcgccgaccgcgtccgcgccgccgtc
gatgctcaccagagcgcccacgccgcctggctcgacctgcgcgagcgccgcctcgccggc
atggcagccgagctggccgcggacctcaccccgggcgacccgtgcgccgtctgcggctct
cccgaccacccggccccagcccacctcgccggcgcggccgcgacgccctccgccgacgcc
gcgtccgacgcttccaccgccggcgccagcgacgccgccgcccacggcgcgaacgcggcc
gacgccgcccacagcgcgcgcgtggccaacgccgatggggcgagtctcgccgagcaggag
cgggcggcgcaggagcggcaggcggtgctcgcggaagagcgctccggatgcgaacggcaa
gcggcggcgcatgcggaggcgctggcggcagcgcgcgcggtcgcgggcgacgcgccggcc
gaggagctgggcgaccgcgcacgccggctcgcgagcgagctgtcggcggcacggacgctc
gccgacgggctggcggggaccgagcgcgcgctcgacgcgctcgcgaccaccacggccgcc
caggagcagcgccgccgcgaggcggagcaaacggtgacgaccgcgcgcgccgcccacgcg
gagcgctcggccgcgctggcggccgaccgcgcacaggtcgccgaggcgcgcggcgacgcg
gacagcatcgcggaccgtgcggactcgctccgcggcacagccgacgcgtgcgagaccgcc
gccgcggcgctggagcacgccgctcgcaccgccgccgcccacgtcgcagccgcggacgcc
gccgagcgggccgcgctcgacgccggcttcacgcctgacgacgccgcgccgctcgcgccg
ccggccgccgacgcggggctgatcgccgcgctcgactcccacgccgcaccgatcgccacg
ccggccgccgacgccgcgcgcgcggcgatgcgcgagggcgacacacaggagcagctggag
cggcggttgcgcgagttcgacgaggggctcgcccagcgcgtcgcgttgatccaggacgag
cagctgcaggccgcggccgccgagcccgcgccggacctcgacgtgctgcgcgagcaggcc
gcggcggcggctcgcgccgacgaggcggcgcacggacggctgacggtcgaccgccgccgc
cacgtcgacgtgatacgcctcgccgccgacctcgacggcgcgctcgaacggctcgcgccc
gtagcggagcaagcacggctcgtgaccgaggtctcgtacctcgtggaaggaagatcctcg
tccaaccgcctcagaatgcggctcgcggcgtacgtgctcgcggcacgcctggaggaggtc
gccgaggcggcgacggcgcgcctggagcggatgtcgaacggccgctacgcgatcgtccac
tccgacggcggcggcaagggccagcgccgcggcgggctcgatctccgcatcctcgacggc
tggaccggcgaggagcgctcgcccgcgacgctctccggcggcgagacgttcctcgccagc
ctcgcgctcgcgctcggactcgccgacgtcgtcgccgccgacgccggcggcagccggctg
gagacgctcttcatcgacgagggcttcggctcgctcgacgagcgcaccctcgacgaggtg
ctcgacgtgctcgacgcgctgcgcgagggcggccgcgcggtcgggatcgtctcccacgtc
gccgagctgcgtcagcgcgtgcccgcgaagctgcacgtcgtcaagggccgcagcggctcg
cacgtcgagcagtccgcagcgaccgccgccgcgtag
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