Synechococcus sp. JA-3-3Ab: CYA_0110
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Entry
CYA_0110 CDS
T00318
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya00470
D-Amino acid metabolism
cya00550
Peptidoglycan biosynthesis
cya01100
Metabolic pathways
cya01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CYA_0110 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CYA_0110 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CYA_0110 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cya01011
]
CYA_0110 (ddlB)
Enzymes [BR:
cya01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CYA_0110 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cya01011
]
Precursor biosynthesis
Amino acid ligase
CYA_0110 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
RimK
ATP-grasp_3
ATPgrasp_ST
CPSase_L_D2
ATP-grasp
TTL
GARS_A
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
ABC98340
CyanoBase:
CYA_0110
UniProt:
Q2JXY2
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All DBs
Position
105410..106381
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AA seq
323 aa
AA seq
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MNIVILAGGRSAERQVSLVTGKACKRALEDLGHRAKLIDPEEDLPLRLWQERQAGCDFVW
IALHGPGGEDGVVQGMLEWLGLPYQGSGPLASALAMDKLVSKQIFRAEGIPTPEWLVWDE
AQPLSWAECVARLGSPLVVKPSNSGSTVGISLARDEVSLAQGLALASSVSSRVFLERYIP
GKEITLSILSGQVLPAIEIIPAQGDFYDYEAKYAPGGSRHLIPCSLSAAGLARCEAAGLR
AYRVLGCEGLARVDLRVDADENPWVLEVNTLPGMTPTSLCPEAAAALGWTFTELVERMLQ
DALQRAALTRSAPSGSRPSPQPA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgttatcttggcagggggtcgttcggcagaacgtcaggtttctttggtaacg
ggcaaagcctgtaagcgggcgctggaggatctggggcatcgggcgaagttgatcgacccc
gaggaggatctgccgctgcgcctttggcaggaacggcaggcaggctgcgacttcgtctgg
attgccctgcatggccccggcggtgaggatggggtggtgcaggggatgctggagtggctg
ggcttgccctatcagggatccgggccgttggccagcgctctggccatggacaagctggtc
tccaagcagatctttcgggccgaagggattcccactcctgagtggctggtctgggatgaa
gcgcagccgctctcctgggccgagtgtgtggcgcgtttgggatccccgctggtggtgaag
cccagcaacagcggctcgacggtggggattagccttgcgcgggatgaggtgtcgttggct
caggggctggcgttggccagctcggtctcctcgcgggtcttcctggagcgctacattccc
ggcaaggagatcaccctctccattctctccggccaggttctcccggccattgagatcatc
cctgcccagggagatttttacgattacgaagccaagtacgcccccggcggctcacggcat
ttgatcccctgttccctcagcgcggcagggctggcccgctgcgaggcggcagggctaagg
gcctatcgggtgttgggatgtgaaggtctggcgcgggtggatctgcgggtggatgccgac
gagaacccttgggtgctggaggtgaacaccctgcccgggatgacccccacttcgctttgc
ccagaggcggcggcagctctgggctggacgtttacggagctggtggagcggatgctgcag
gatgccctgcagagggcggcattgactcgctcggccccgtctggatcccggccttcgcca
cagccggcctga
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