Synechococcus sp. JA-2-3B'a(2-13): CYB_0089
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Entry
CYB_0089 CDS
T00319
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CYB_0089 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyb03400
]
CYB_0089 (xseB)
Enzymes [BR:
cyb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CYB_0089 (xseB)
DNA repair and recombination proteins [BR:
cyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CYB_0089 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
YscO
DUF2630
KxDL
DUF503
DUF1707
DUF4088
DUF5830
Motif
Other DBs
NCBI-ProteinID:
ABD01090
CyanoBase:
CYB_0089
UniProt:
Q2JQ26
LinkDB
All DBs
Position
105274..105510
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AA seq
78 aa
AA seq
DB search
MSRRKREEPWRYEAAIAEVETLIAQIESGELDLAEVVERFQQAAQTLKTCADFLEQKRQQ
VEIIIEQLGQEEEDLPES
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgcaaacgtgaggagccgtggcgctatgaagcagccattgccgaggtggaa
actttgattgcccagattgaatcgggggaactggatctggcagaagtggtggagcgcttt
caacaggccgcccaaaccctgaaaacctgcgcggactttttagagcaaaagcggcagcag
gtggagatcatcatcgagcaattgggccaagaggaagaagacctgcccgaatcatag
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