Synechococcus sp. JA-2-3B'a(2-13): CYB_2109
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Entry
CYB_2109 CDS
T00319
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb00470
D-Amino acid metabolism
cyb00550
Peptidoglycan biosynthesis
cyb01100
Metabolic pathways
cyb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CYB_2109 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CYB_2109 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CYB_2109 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cyb01011
]
CYB_2109 (ddlB)
Enzymes [BR:
cyb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CYB_2109 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cyb01011
]
Precursor biosynthesis
Amino acid ligase
CYB_2109 (ddlB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATPgrasp_ST
ATP-grasp_3
RimK
ATP-grasp
TTL
GARS_A
ATP-grasp_4
ATPgrasp_YheCD
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ABD03055
CyanoBase:
CYB_2109
UniProt:
Q2JJV2
LinkDB
All DBs
Position
complement(2202565..2203542)
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AA seq
325 aa
AA seq
DB search
MNIVVLAGGRSAERQVSWVTGKACKRALEDLGHRVKVIDPDEDLPLRLWQERQAGCDFVW
IALHGPGGEDGVVQGMLDWLGLPYQGSGPLASALAMDKLVSKQIFRAAGIPTPDWQVWDD
QNPLTWADCAAELGSPLVIKPSNNGSTVGISIVRDERSFAQGLELARSVSSRIFLERYVP
GKEITLSILSGQVLPAIEIIPAQGDFYDYEAKYAPGGSRHLIPCSLSPAGLARCEAAGLK
AYQALGCEGLARVDLRVDPEENPWVLEVNTLPGMTPTSLCPDAAAALGWTFTELVERMLQ
DALQKAQLTGSRHPQSSSATLGNAP
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgttgtcttggcgggggggcgttcggcagaacgtcaagtctcttgggtaacg
ggtaaagcctgcaaacgggctttggaggacctgggccatcgggtcaaggtaatcgaccca
gatgaggatctgcctctgcgcctttggcaggaacggcaagccggctgcgacttcgtttgg
attgccttgcatggccctggtggcgaggatggggtggtacagggaatgctggactggctg
ggcctgccctaccagggatccgggccgctggccagtgctctggccatggataagctggtc
tccaagcagatctttcgcgccgcggggatccctacccccgattggcaggtttgggatgac
caaaaccccctcacttgggccgactgtgcggcagagttgggatccccactggtgattaag
cccagcaacaacggctcgacggtgggcatcagcattgtccgggatgagaggtcatttgct
caggggctggagttggcccgctcggtctcgtcgcggatttttctggagcgctatgttccc
ggaaaggagatcaccctctcgatcttgtccggccaagttcttccggccattgagatcatc
cccgcccaaggcgacttctacgactacgaagccaagtacgcacccggtggctcgcggcat
ttgatcccctgttccctcagcccggcagggttggcccgctgtgaggcggcaggtctgaag
gcctaccaggcgttggggtgcgaaggcttggcgcgggtggatctgcgggtggatcccgag
gaaaatccttgggtgttggaggtgaatacactgcccggcatgacccccacttccctctgt
cccgatgcggcggcagctctggggtggacgttcaccgagttggtggagcgaatgctgcag
gatgccttgcaaaaagcccaattgaccggatcccggcatcctcaaagttcatcggcgact
ctcggcaacgctccctga
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