Rippkaea orientalis PCC 8802: Cyan8802_0256
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Entry
Cyan8802_0256 CDS
T00968
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cyh
Rippkaea orientalis PCC 8802
Pathway
cyh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cyan8802_0256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyh03019
]
Cyan8802_0256
03016 Transfer RNA biogenesis [BR:
cyh03016
]
Cyan8802_0256
Enzymes [BR:
cyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cyan8802_0256
Messenger RNA biogenesis [BR:
cyh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cyan8802_0256
Transfer RNA biogenesis [BR:
cyh03016
]
Prokaryotic type
tRNA degradation factors
Cyan8802_0256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
ACU99222
LinkDB
All DBs
Position
238365..240521
Genome browser
AA seq
718 aa
AA seq
DB search
MQEFDKSISFDGRDIRLKLGLLAPQAGGSVLIQSGDTAVLVTATRATGREGIDFLPLTVD
YEERLYAAGRIPGGFLRREGRPPEKAILISRLIDRPLRPLFPQWLRDDIQIIATTLSMDE
EVPPDVLAVTGASIAVIAARIPFFGPMAAVRVGLIGDDFIINPTYREIEIGDLDLVVAGS
PDGVVMVEAGANQLPEQDIIEAIDFGYEAVRDLIQAQRDVMEALDIPLVIGEPPAVNEVL
QSFISDRASESIKKVLMQYNLDKNARDEQLDEIKETAITNAIAELPEEDPVKVAATEEPK
AVSNLYKDLTKKLMRSQIITDGVRVDGRKLDEVRPISSRVCLLPRRVHGSALFARGLTQV
LSLATLGTPGDAQDLADDLHPEDEKRYLHHYNFPPFSVGETKPLRSPGRREIGHGALAER
AITPILPPQEEFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPITKPVSGAAMGLI
KEGDEVRILTDIQGIEDFLGDMDFKVAGTDSGITALQMDMKITGLSMEIVAKAIEQALPA
RLHILDKMMETLSTPRKNLSPYAPRLLTMKIDPEQIGLVIGPGGKTIKGITEQTGSKIDI
ADDGTVTIAALEAEKAEKAKQIIYNMTRKLNEGEVYMGRVTRIIQIGAFVEVLPGKEGMI
HISQLAEGRVGKVEDEVAVGDEVIVKVREIDAKGRLNLTRLGIHPDEAAAARKAVAPV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagtttgataagtcaatatcctttgacggaagagatattcgactcaagttagga
ctgcttgctccccaagcaggggggtctgtcttaatacagtcgggagatacggcggtttta
gtcacagcaacacgggcaacaggaagagaaggaatcgattttctgcccctcacggtcgat
tatgaagaaagattgtatgcggcggggcgtattccagggggttttttgcgacgggaaggt
cgtccccccgaaaaagctatattaattagtcgtttgattgatcgtcccttacgtcctttg
tttccccaatggttacgggatgatatccaaatcattgccacaaccttatccatggatgaa
gaagtcccccccgatgtattagcggtaacaggggcttctattgccgttattgctgcaaga
attcccttttttggaccgatggctgctgttagagtgggcttaattggggatgacttcatt
attaaccccacctaccgagaaatcgaaatcggagacttagatttagtcgttgcggggagt
cccgatggagtggtgatggttgaagcaggagctaatcaactaccagaacaagatatcatc
gaagcgattgactttggctatgaagccgttcgagacttgattcaagcgcaacgagatgtt
atggaagcgttggatatcccattagtgataggagaacctccggccgttaatgaagttctt
cagtcgtttattagcgatcgcgcctctgaatccatcaaaaaagtgctcatgcagtacaat
ttagacaaaaacgcacgagatgaacagcttgatgagatcaaagaaaccgccattaccaat
gcgatcgccgaactccccgaagaagaccccgttaaggtagcagcgacagaagagccaaaa
gccgttagcaacctttacaaagacctgaccaaaaaattgatgcgctctcaaatcatcact
gacggagttcgagttgatggtcggaaattagacgaagtacgtcctatctccagtcgagtt
tgtctattaccgagacgggttcatggtagtgccctgtttgcacggggtctaactcaagtc
ctctccttagcgaccctaggaacgccaggagatgctcaggacttagccgatgatcttcac
cccgaagacgaaaaacgctatttgcatcactataatttccctcccttctccgtaggtgaa
accaaacccctacgctcccctggacggcgggaaatcggtcacggagccctggcagaacgg
gctattaccccgattcttcctcctcaagaggagtttccctacgttatccgcgtcgtctca
gaagtgctgtcttctaatggttcaacctccatgggatcggtgtgcggttcaaccctcgcg
ttgatggatgcaggagttcccattaccaaacccgtcagtggggcagccatgggattgatc
aaagaaggggatgaggtccgtattctaaccgatattcaaggcattgaagactttttaggg
gatatggactttaaggtggccggaaccgatagcgggattactgctctccagatggatatg
aaaatcacgggattatccatggaaatcgtcgctaaagctattgaacaggctcttccggct
cgtttgcatatcctggataaaatgatggaaaccttgagtactcctcggaagaatctttct
ccctatgcaccgcgcctgttgaccatgaagatcgatcccgaacaaattggcttggtcatt
ggtccgggaggtaaaaccattaaggggattacggaacaaaccgggtcgaagatcgatatt
gctgacgatggaactgttaccattgccgcgctagaagcggaaaaagccgagaaagccaag
caaattatctacaatatgacccgtaaactcaatgaaggggaagtctatatgggtcgcgtg
acccgtattattcagattggggcatttgttgaggttctccccggcaaagaaggcatgatc
catatttcccagttagcagaagggcgtgtgggtaaggttgaggatgaagtcgcggtggga
gatgaagttatcgtcaaagtccgcgaaattgatgccaaaggccgcttgaatttgacccgt
ttgggtatccatcctgatgaagccgccgcagcgcgtaaagcggttgctcccgtttaa
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