Rippkaea orientalis PCC 8801: PCC8801_1282
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Entry
PCC8801_1282 CDS
T00806
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cyp
Rippkaea orientalis PCC 8801
Brite
KEGG Orthology (KO) [BR:
cyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyp03032
]
PCC8801_1282
03400 DNA repair and recombination proteins [BR:
cyp03400
]
PCC8801_1282
Enzymes [BR:
cyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PCC8801_1282
DNA replication proteins [BR:
cyp03032
]
Prokaryotic type
DNA Topoisomerases
PCC8801_1282
DNA repair and recombination proteins [BR:
cyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PCC8801_1282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACK65347
UniProt:
B7K3K5
LinkDB
All DBs
Position
complement(1329788..1331713)
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AA seq
641 aa
AA seq
DB search
MTTSDYGAQQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIE
IDINSDGSVTVTDDGRGIPTDIHPTTGKSALETVMTVLHAGGKFGGGGYKVSGGLHGVGI
SVVNALSEWVNVTVWREGNIHTQRYERGNPVTSLAANPDPDHSTGTSISFLPDIEIFSGG
IEFDYNTLSGRLRELAYLNAGVKITFTDNRPAEIHQETYCYEGGIKEYVAYMCRDKDALH
QDIIYVSGEKNGVQIEVALQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTINNV
ARKRNKIKENEANLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEV
LNEYLEFNPQVADNIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRDPE
ESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGL
GIKGEEFDPSQLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRELVDQGYVYIACPPLYK
VERGRNHVYCYNERELQEHLNSLPANANYTIQRFKGLGEMMPTQLWETTMNPETRTMKRV
EIEDAAEADRIFTVLMGDRVAPRREFIETYGPKLNLTDLDI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgagtgattacggtgcacaacagatacaagttctcgaagggttagaacccgtc
cgcaagcgtccagggatgtatatcgggacaaccggaccgaggggactccatcatctcgtc
tatgaagtggttgataattccattgatgaagcgttagccgggtactgtacgcacattgaa
atcgatattaactccgatggatccgtaaccgttaccgacgatggtcggggtattcccacg
gatatccatcctactacgggaaaatctgccttagaaaccgtaatgaccgttctccacgct
ggcggtaaatttggcggtggcggctacaaggtgtctggagggttacacggggtgggaatt
tccgtggtcaacgctttatcagaatgggtgaatgtgacggtttggcgagaaggaaatatc
catacccaacgctacgaacgggggaaccctgttacctctctagcagctaaccctgacccc
gaccattcaacgggaacgtctatttcttttttacctgatattgaaattttctcaggggga
attgagtttgattataatactttgtcaggaagattacgcgaattagcctatttgaatgca
ggggttaaaattacctttactgataatcgtcccgcagaaattcaccaagaaacctattgt
tatgaaggcggaattaaggaatatgtcgcctatatgtgtcgggataaagacgcattacac
caagatattatttatgtttcaggggagaaaaatggggttcaaattgaagtggctttgcag
tggtgtattgatgcctatagtgataatttattaggctttgctaataatattcggacgatt
gacgggggaacccatttagaaggattaaaaaccgttcttactcggacgattaataatgtt
gctcgcaaacgcaataaaatcaaagaaaatgaggctaatttagggggagaaaacgtccgc
gaggggttaacaggggtgatatcggttaaagttcctgaacccgaatttgaaggacagaca
aaaaccaagttaggcaatacagaagtgcgaggtattgttgactctttggtgggagaagtt
ctcaatgaatatttagaatttaatccccaggtcgcggataatattattgagaaagcagta
caggcgtttaaggcagcagaagcagcgcgtcgggcacgggaattagtgcgacgcaagtcg
gttttagaatcatctcccttacctggaaaattagcagattgtagtaccagagatcctgaa
gaatcggaaattttcttagtagaaggagactccgcaggaggaagcgcgaaacagggacgc
gatcgccgttttcaagccatcctaccgttacggggtaaaatcctcaatattgagaagaca
gatgatgctaaaatctacaaaaataatgagattcaatctttaattactgccctaggatta
ggcattaaaggagaagaatttgatccctcccaattgcgctatcatcgtgttgttattatg
accgatgctgacgtagatggagcccatattcggacgcttttattgacctttttctatcgc
tatcaacgcgaattagttgatcagggatatgtttatattgcttgtcctccgttgtataaa
gtagaacggggacgcaatcatgtctattgttacaatgaacgggaattacaagaacatttg
aatagtttacccgctaatgctaactatactattcaacggtttaaagggttaggagaaatg
atgcctacccaactgtgggaaacgacaatgaaccccgaaactcgaacgatgaaacgggta
gaaattgaagatgctgccgaagcggatcgtatctttaccgtactgatgggcgatcgcgta
gccccaagacgagaatttattgaaacctatggacctaagttaaatctaaccgatttggat
atttag
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