Candidatus Atelocyanobacterium thalassa: UCYN_00290
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Entry
UCYN_00290 CDS
T01159
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
cyu
Candidatus Atelocyanobacterium thalassa
Pathway
cyu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UCYN_00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyu03400
]
UCYN_00290
DNA repair and recombination proteins [BR:
cyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UCYN_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_2
UVR
HHH_5
HHH_3
HHH
Mut7-C
YgjP-like
Motif
Other DBs
NCBI-ProteinID:
ADB94785
UniProt:
D3EMT5
LinkDB
All DBs
Position
complement(28767..30656)
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AA seq
629 aa
AA seq
DB search
MLVMQKYKQLLLNNNALKNKLKEFPLEPGVYLMLDKQEDILYIGKSKRLRVRVRSYFQEG
QYHTPRINLMLQQVNNIEFIVTDNEAEALALEANLIKQYQPYFNVLLKDDKKYPYVCITW
SEEYPRIFITRKRRLDNKKDRYYGPYVDTHKLRETLRLVRRVFPLRQRKRPLFKDRPCLN
YDIGRCPGVCQKLITSNQYHKIVAKIAMIFQGRTEELVQRLDTQMKLYSTQLKFEQAAQI
RDRIEALQELNINQKVVLPNDTVSRDVIALASDNSCTCIQLFQIRGGRLIGRLGFFADNI
SGTLGSILQRVLEEHYWQVEPIEIPNEVVVQYELPKVDVFTDWLKNKKGKKVTVTVPKKQ
QKIEIINLVQRNAAYELEKTQKDMEQNLSSLQDLTTILNLKNIPYRIEGYDISHIQGSNA
VASQVVFINGIPAQQSYRHYKIKNTAIGIGHSDDFACLAEVIGRRFNSYRNLKIEDLLKL
DDYPNLVLIDGGKGQLSAVVKILKEMKLFPLLEVISLAKKNEEIFVPGNSNALITNSEQP
GLKLLRKVRDEAHRFAINYHRQQRLKYSRSSQLDDIPGLGFQRQKELLSFFHSVDYIREA
SVESLRKAPGIGYSLAREIYEYFHPDKIS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttggttatgcaaaagtataaacaattattgctcaataacaatgctttaaagaataaa
ctaaaagaatttccattagagcctggagtttatctaatgctagataaacaagaagatatt
ctttatattggtaagtcaaaacgcttaagggtaagggttcgctcctatttccaagaaggt
caataccatacccctcgtattaacttaatgcttcaacaagttaataatattgaattcatt
gttactgataatgaagcagaagcactagctttagaagctaatttaattaagcaatatcaa
ccatactttaatgtacttttaaaagatgataaaaaatatccttatgtttgtattacttgg
tctgaagaatatccaagaatatttattactcgtaaaagacgactcgataataaaaaagat
cgctattacggaccatatgttgatacccataaattacgagaaacactgcgtttagttaga
cgtgtttttcctttacgccaaagaaagcgtcctttatttaaggatcgaccttgtttaaac
tatgatattggtcgctgtcctggagtctgccaaaaactaattacttctaatcaatatcat
aagattgttgctaaaatagcaatgatatttcaaggccgtactgaagaattagtacaaaga
ctagatactcaaatgaagctatattctacacagttaaaatttgagcaggcggcacaaata
agagatagaatcgaagctcttcaggaactcaatattaatcaaaaagtggttttaccaaat
gatacagtttcacgtgatgtaattgccttagcatctgacaatagctgtacttgtatacaa
ttatttcaaattcgtgggggacgtttaataggccgcctgggcttttttgctgataatatt
tctggaactttaggcagcatattacaaagagttttggaagaacattattggcaagtagaa
ccgatagaaataccaaatgaagttgtagtgcaatatgagcttcctaaagtagatgttttt
acggactggttaaaaaataagaaaggtaaaaaagttactgttactgttcctaaaaagcag
caaaaaattgaaattattaatctagttcaacgtaatgcagcatatgaactagaaaaaacc
caaaaagatatggagcaaaacttatcatctttacaagatttgactacgatattaaattta
aaaaatattccttataggatagaaggctacgatatttctcacatccaaggttctaatgct
gttgcatcgcaagttgtatttattaatggaattccagcccaacaatcttatcgtcattat
aaaatcaagaatactgccattggcataggtcattctgatgattttgcatgtttggcagaa
gttattggtagaagatttaactcctaccgtaatttaaaaatagaagatttattaaaacta
gatgattatccaaacttagtattaatcgatggtggtaaaggccaactttctgcagtggta
aaaattttaaaagaaatgaaactttttcctttattagaggttattagtttggctaaaaaa
aacgaagaaatatttgtgcctggaaattctaacgctttaattaccaattcagaacaaccg
ggtttaaaactattaagaaaagtcagagatgaagcacaccgttttgctatcaattatcat
cgtcagcaacgtctcaagtatagtcgttcatctcaactagacgatatacctggtttagga
tttcaaaggcaaaaagagcttctttctttttttcattcagttgattatattagggaagct
tctgttgaaagtttacgaaaagccccagggataggatattctctagcaagagaaatatat
gaatattttcatccggataagatatcctaa
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