Cycloclasticus zancles: CYCME_0900
Help
Entry
CYCME_0900 CDS
T02780
Name
(GenBank) Oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cza
Cycloclasticus zancles
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cza03019
]
CYCME_0900
03009 Ribosome biogenesis [BR:
cza03009
]
CYCME_0900
Messenger RNA biogenesis [BR:
cza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CYCME_0900
Ribosome biogenesis [BR:
cza03009
]
Eukaryotic type
Pre-60S particles
RNases
CYCME_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AGS39233
UniProt:
S5TW58
LinkDB
All DBs
Position
887899..888447
Genome browser
AA seq
182 aa
AA seq
DB search
MSQDKQNLIWIDLEMTGLEPASDSIIEIATIVTDKELNVLAQGPVLAVRQTKQTMDAMDD
WNQQHHGQSGLIERVLKSSLSERDAEQQTIDFLEKWVPQGASPMCGNSICQDRRFMANYM
PTLEAFFHYRNLDVSTLKELAGRWAPEIMKGFKKKATHQALDDVIESIEELKYYREHFIK
IG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagataaacagaatttaatatggatagaccttgaaatgacgggtttagaacct
gccagcgattctatcattgaaatagcaacgattgtcaccgataaggaactgaatgtgctt
gcacaagggccggtgttagcagtacgtcaaacaaaacaaacgatggatgcaatggatgat
tggaatcagcagcaccatggccagtctggcttgattgagcgcgttttaaaaagttcatta
tcagaacgcgatgctgaacagcaaaccattgattttttggagaaatgggtcccacaaggt
gcttcacctatgtgtggaaacagtatttgccaagaccggcgttttatggcgaactatatg
ccaacgctagaggcattttttcattacagaaatttggacgtgagcacgttaaaagaattg
gcaggccgttgggcaccagaaataatgaagggctttaagaaaaaagcgacgcaccaggct
ttagacgatgttatcgagtcaatagaagaattaaagtactacagagagcattttataaaa
attggctaa
DBGET
integrated database retrieval system