Clavibacter zhangzhiyongii: H9X71_04265
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Entry
H9X71_04265 CDS
T07408
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
czh
Clavibacter zhangzhiyongii
Brite
KEGG Orthology (KO) [BR:
czh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
czh03032
]
H9X71_04265 (topA)
03400 DNA repair and recombination proteins [BR:
czh03400
]
H9X71_04265 (topA)
Enzymes [BR:
czh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9X71_04265 (topA)
DNA replication proteins [BR:
czh03032
]
Prokaryotic type
DNA Topoisomerases
H9X71_04265 (topA)
DNA repair and recombination proteins [BR:
czh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9X71_04265 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QOD44559
UniProt:
A0A7L7Z4H3
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All DBs
Position
879432..882377
Genome browser
AA seq
981 aa
AA seq
DB search
MPGTKKLVIVESPAKAKTIAQYLGSGYEVQASVGHIRDLIEPKNLPPELKKGTLGKFSVD
VENGFEPYYVVSDQKKKTVADLKRALKDADELFLATDEDREGEAIAWHLLQVLKPKVPVK
RMVFHEITKEAIERARDSTRDIDTALVDAQETRRILDRLYGYEVSPVLWRKVGPGLSAGR
VQSAATRLVVDRERERLAFVTASYWDLTASLSPLEQELPFDARLVRIDGARIATGRDFDD
KGALKNDSRPLDASTAEALAEALRDPSVPLRVQSVESKPYTRRPAAPFTTSTLQQEAARK
LRFSARQTMSVAQSLYENGYITYMRTDSPSLSQQAINAARKQAAELYGPETVPDKPRLYA
GKSKNAQEAHEAVRPAGETFRTPQQLASTLRGNDHKLYDLIWKRTIASQMADAKGSTASV
VIAAGPTSAGEVAEFAASGTVITFRGFLAAYEEGRDEERHGAAEPREAKLPDLKKGQDLR
LVDVDAKGHETSPPPRYTEASLVKTLEELGIGRPSTYAAIISTIVDRGYVTPRGTALVPN
WIAFSVVRLLEEFFTELVQYDFTAGMENDLDRIADGSAERVDWLKGFYYGNDAHKGLRPT
IDNLGEIDAKEINSLRIADDITLRIGKYGPYLEVHEEGAEPDATPRRVNLPEDLAPDELT
SAKARELIDAPVVTDRVIGINPDNGKQIVAKDGRYGPYVTELDPEPEEAPAAPADGVDPA
TGEVLEAAAATTTAAPAKKAPAKKPAAKKAAAVKPRTASIFKSMDLATVDLETALRLLDL
PRVVGDDPETATPITAQNGKYGPYLKKGTDSRSLTSEEQIFEIDLAGALEVFAQPKYGAR
RPSSALKELDADPVSGKGIKVKDGRFGPYVTDGETNATIPKSESVEDIDFDRAVELLADK
RAKGPAKPKAKAPAKAKAKAPAKAKAPAKPRAAAAKATTAKATTAKASTATTAARSAAAT
KAAATRAANKAAAAAKASDAT
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggcacgaagaagttggtcatcgtcgagtcgccggccaaggccaagacgatcgcc
cagtacctgggcagcggatacgaggtgcaggcctcggtcggccacatccgcgatctcatc
gagccgaagaacctgccccccgagctcaagaagggcacgctcggcaagttctccgtcgac
gtcgagaacggcttcgagccgtactacgtcgtcagcgaccagaagaagaagacggtcgcc
gacctgaagcgcgcgctcaaggacgccgacgagctcttcctcgcgacggatgaggaccgc
gagggtgaggccatcgcctggcacctgctgcaggtgctgaagccgaaggtcccggtcaag
cgcatggtgttccacgagatcaccaaggaggccatcgagcgggcgcgggacagcacgcgc
gacatcgacacggccctcgtcgacgcgcaggagacccggcgcatcctcgaccgcctctac
ggctacgaggtgtcgccggtcctctggcgcaaggtcggcccgggactctccgcgggccgc
gttcagtccgccgccacgcgcctcgtcgtcgaccgggagcgcgagcggctcgccttcgtc
accgcgtcgtactgggacctcacggcatcgctgtcgccgctcgagcaggagctgccgttc
gacgcgcggctcgtgcgcatcgacggggcgcgcatcgccaccggtcgggacttcgacgac
aagggcgcgctgaagaacgactcccggccgctcgacgcgtccaccgcggaggccctcgcc
gaggcgctgcgcgacccgtccgtgcccctgcgggtgcagagcgtcgagtcgaagccgtac
acgcgtcggcccgccgcgcccttcaccacgtcgaccctgcagcaggaggcggcgcgcaag
ctccgcttctccgcgcgccagacgatgagcgtcgctcagtcgctctacgagaacggctac
atcacctacatgcgcaccgactcgccgtcgctgtcgcagcaggcgatcaacgcggcgcgc
aagcaggcagccgagctctacggcccggagacggtgcccgacaagccccgcctctacgcg
ggcaagagcaagaacgcgcaggaggcccacgaggccgtccgcccggcgggcgagaccttc
cgcaccccgcagcagctcgcctccaccctgcgcgggaacgaccacaagctctacgacctg
atctggaagcgcaccatcgcgtcgcagatggcggacgccaagggatcgaccgcgtcggtc
gtcatcgccgcgggccccacctccgcgggcgaggtcgccgagttcgccgcctccggcacg
gtcatcaccttccgcggcttcctggccgcgtacgaggagggccgcgacgaggagcgccac
ggcgcggccgagccgcgcgaggccaagctgcccgacctcaagaagggccaggacctccgc
ctcgtcgacgtcgacgccaagggccacgagaccagcccgccgccccgctacacggaggcg
agcctggtgaagacgctggaggagctcggcatcgggcgtccctccacgtacgccgccatc
atctcgaccatcgtcgaccgcggctacgtgacgccgcgcggcacggcgctggtgcccaac
tggatcgccttctcggtggtccggctcctcgaggagttcttcacggagctggtgcagtac
gacttcaccgcgggcatggagaacgacctcgaccgcatcgcggacggctccgccgagcgg
gtcgactggctgaagggcttctactacgggaacgacgcccacaagggcctgcgtcccacc
atcgacaacctcggcgagatcgacgccaaggagatcaactcgctgcgcatcgcggacgac
atcacgctgcggatcggcaagtacggcccgtacctggaggtgcacgaggagggcgccgag
cccgacgcgacgccccgccgcgtcaacctcccggaggacctcgcgcccgacgagctgacg
tccgccaaggcgcgcgagctcatcgacgcgcccgtggtcacggaccgggtcatcggcatc
aacccggacaacgggaagcagatcgtcgcgaaggacggcaggtacgggccttacgtgacg
gagctggaccccgagcccgaggaggctcccgcggctcccgccgacggcgtcgacccggcg
acgggcgaggtgctcgaggcagctgccgcgacgaccacggcggcgccggccaagaaggcg
cctgccaagaagcccgccgccaagaaggcggccgcggtcaagccgcgcacggcgtccatc
ttcaagtcgatggacctcgcgacggtcgacctcgagacggctctccgcctgctcgacctc
ccgcgcgtcgtcggcgacgacccggagacggccacgcccatcacggcgcagaacggcaag
tacggcccctacctcaagaagggcaccgactcgcggtcgctcacgagcgaggagcagatc
ttcgagatcgacctcgcgggtgccctcgaggtgttcgcgcagccgaagtacggggcgcgt
cgaccctcgagcgcgctgaaggagttggacgccgacccggtgagcggcaagggcatcaag
gtcaaggacgggcgcttcggcccctacgtgaccgacggggagacgaacgcgacgatcccg
aagagcgagtccgtcgaggacatcgacttcgaccgggccgtcgagctgctcgcggacaag
cgcgccaaggggcccgcgaagccgaaggcgaaggccccggccaaggcgaaggcgaaggcg
cccgccaaggcgaaggccccggcgaagccgcgggctgctgcggcgaaggcgaccaccgcg
aaggcgaccaccgcgaaggcgagcaccgcgaccacggctgctcgctcggcggccgccacc
aaggcggccgcgacgcgtgccgcgaacaaggccgctgccgcggcgaaggcgtccgacgcg
acgtga
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