Desulfofarcimen acetoxidans: Dtox_0809
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Entry
Dtox_0809 CDS
T00986
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dae
Desulfofarcimen acetoxidans
Pathway
dae03030
DNA replication
dae03430
Mismatch repair
dae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dtox_0809
03430 Mismatch repair
Dtox_0809
03440 Homologous recombination
Dtox_0809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dae03032
]
Dtox_0809
03400 DNA repair and recombination proteins [BR:
dae03400
]
Dtox_0809
Enzymes [BR:
dae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dtox_0809
DNA replication proteins [BR:
dae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dtox_0809
DNA repair and recombination proteins [BR:
dae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dtox_0809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
HROB
DUF6282
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ACV61717
UniProt:
C8W253
LinkDB
All DBs
Position
823104..826541
Genome browser
AA seq
1145 aa
AA seq
DB search
MPSFVHLHVHTEYSLLDGAARIKEVVKKAKSLGMSALAITDHGVMFGVVDFFKACKKEGI
KPILGCEVYVAPRSRHDRTPRVDDNLYHLVLLAKNETGYRNLLNLVSISFTEGFYYKPRV
DKEVLAMYSEGLIALSGCIAGEVAEYILKDLPEQARAAAAEYLKIFGEDNYYLEIQDHSF
PEQKKANRELVKISEELNIPLVATNDVHYVAKENAEMQDVLLCIQTGKTVDDPKRMKFQS
QEFYLKSPEEMAELFPELPQALQNTVSIADKCEISMEFGQLHLPFYQVPEGHTVESYLRE
LCEKGLLDRYGAAPEESVRQRMEFELSVIEQMGYSAYFLIVWDFIDYARQNGVPVGPGRG
SAAGSLVSYVLGITNLDPLKYDLLFERFLNPERVSMPDIDIDICYERRNKVIEYVVRKYG
AERVAQIATFGTMAAKGAIRDVGRALAMSYGEVDRVAKLVPAELHMTIEKALSENQDLLE
AYNNEPEVRRLIDTAKGLEGMPRHASTHAAGVVITKQPLTHYLPLYKSTDGPVTTQFAKE
PVEELGLLKMDLLGLRTLTVIADAVAEVNKRAGSPLDIDKITLEDKNTFDLLSRGEGIGV
FQLESSGMRAILRDLKPEVFEDIVALVALYRPGPLGSGMVDDFIKNKHGLQKVSYLHPIL
EPILKDTYGVILYQEQVMRISSDLAGFSLGEADLLRRAMGKKKPEVIAGLRSQFMEGAAK
KDVDPEVAGKVFDLMEFFAGYGFNKSHSAAYALVSYQTAYLKANYPAEFMAALLTSVRDN
SDKVAVYIEECRRMGIVVLPPDVNESRDGFTVVGDKIRFGLAAMKNVGLAAVYSIISMRE
QGGPFKNYADFCNRLDTRVVNRRVLESLIKGGAFDSLGHRRAQLMAVVDTGLSIAQQAQR
DRNSGQMSLFEFLEEEEEYNLSFVLPDIAEYLYSEMLALEKESLGLYISGHPLAEYREVL
RQNDTVNAGELPDFTEGETVALGGLIINYKQITTKKGDAMAFVNLEDLTGVVEVVIFPRI
FKQYRQLLQPDRVVLVKGRVNQAGEEIKIIAEEVSSLVKTTQGDLYLQFIKRDMQTVKQV
QLILQTYPGNNHVYLYFPQEKKLAKTSENYWVNLDSEVVKELEQVLGVSNVRIKQKAPAQ
EAVSL
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
ttgccttcttttgttcatcttcatgtgcatactgagtatagcttgctggacggggcggcc
cggattaaagaagtggtgaaaaaggccaaatccctgggcatgtctgctttggccataact
gaccacggggttatgttcggggtggtggacttttttaaggcctgtaaaaaggaaggcatc
aagcctatcctgggctgtgaggtttatgtggcgccgcgcagcaggcatgatcgcacaccc
agagtggatgacaacctctaccacctggtattgctggctaagaatgaaacaggctacaga
aatctgctcaacctggtttccataagtttcactgaagggttctattacaagccaagagtg
gataaagaagttctggctatgtacagtgagggattgattgccttgagcggttgtattgcc
ggggaagtggccgagtatattttaaaagacttgcctgagcaggctagggctgccgctgct
gaatacctgaaaatttttggtgaggacaattactacctggaaatccaggatcacagtttc
cccgagcagaaaaaagccaatcgggaactggtaaaaataagcgaagagctgaatattccg
ctggtggctaccaatgatgtgcattatgtggctaaagaaaacgctgaaatgcaggatgta
ttgctttgcatccagaccggtaaaacagtggatgaccctaaaagaatgaaattccaatcc
caggagttttacctgaaaagcccggaggaaatggcggagctttttcctgagctgccgcaa
gcgctgcaaaatacagtgtcaatagctgataagtgtgagataagcatggagtttggccaa
ctgcacctgcctttttaccaggtgccggaggggcatactgtggaaagctatttaagggaa
ctgtgcgaaaaaggtttgctggacaggtacggggcggcacccgaggaaagtgtcaggcag
agaatggaattcgagttatccgttatcgagcaaatgggttattcggcttattttttaatt
gtctgggacttcatagattatgcacggcaaaacggtgttccggtgggccctggccgcggc
tcggcagccggcagcctggtatcctatgtgttgggaattactaacctggatcccttaaaa
tatgacctgctgtttgaaaggtttttgaacccggaacgtgtctcaatgccggatattgat
atagatatatgttatgaacgccggaataaagtaattgaatatgtagtgcggaaatacggg
gctgaacgggtagcccagatagccactttcggtaccatggcggctaaaggagctattcgt
gatgtcgggcgggctttagccatgtcctacggtgaagtggacagggtagccaagctggtg
ccggccgagctgcatatgaccattgagaaggctttaagtgagaaccaggacttgttggaa
gcttacaataatgaaccggaagtgcgcaggctgattgatactgccaaaggcttggaaggc
atgccccgccatgcctctactcacgcagccggcgtggtaattaccaaacagcctttgacc
cattacctgcccttgtataagtccacggacggtccggtaactacccagtttgccaaggaa
ccggtggaagaactggggctgttaaaaatggatcttctgggattgcgcaccctgactgtt
atagccgatgctgtggcagaggtaaataaaagagccggttcccctctggatattgacaaa
attacactggaagataaaaatacctttgatcttttatcccggggtgagggtattggtgtg
tttcagttagaaagcagtggcatgagagctattctgcgcgatttaaaaccggaggttttt
gaggatattgtggccctggtggccctttaccggcccggtcctttgggcagcggtatggtt
gacgattttatcaaaaacaagcacgggttgcaaaaggtttcctatttgcatcctatcctg
gaaccgatattgaaagacacttatggggttatcctctaccaggaacaggtaatgcgtatc
tccagcgacctggccggttttagtctgggtgaggcggatcttttgcgccgggctatgggc
aagaaaaaaccggaggtaattgccggtctgcgttctcaatttatggagggcgcggctaaa
aaagatgtggacccggaagtcgccggtaaagtatttgatttgatggagttttttgccggt
tacggcttcaataagagccacagcgcagcttatgcactggtttcttaccagactgcttat
ttaaaggccaattacccggcagagtttatggctgctcttttaacctcggttagagacaac
tctgacaaggtagcagtctatattgaagagtgcaggcgcatgggcatagtagttttgccg
cccgatgtcaatgaaagccgggatggttttacggtagtcggcgataaaattcgttttggc
ctggcggcaatgaaaaatgtcgggctggcagctgtctattcgattatttccatgcgtgag
caaggcgggccgttcaaaaattatgctgatttttgtaaccgtttggataccagagtagtt
aaccggagagtgctggagagtttgattaaaggcggggcctttgattctttgggtcacagg
cgggcccagcttatggctgtggtcgataccggcctgagcattgcccaacaggcacagcgg
gatagaaacagcgggcaaatgtcgctttttgaatttttggaagaagaggaagaatataat
ttgtcttttgtattgcctgatattgctgagtatctctacagtgaaatgctggctctggaa
aaagaatcattgggactgtatatcagtgggcatcccctggccgaataccgtgaggtatta
cgccaaaacgatactgttaatgcgggggaattgccggatttcaccgaaggcgagacagtg
gcgctgggcggcttaattataaattacaaacagataaccaccaaaaaaggcgatgctatg
gcctttgtcaatctggaggatttaaccggggtagttgaagtggtgatttttccgcgtatc
ttcaaacaataccggcaattgctgcagcctgacagggtcgtactggttaagggcagagta
aaccaggccggtgaggaaataaaaataattgccgaggaagtatcctctttagttaaaacg
acacagggggatttatacctgcagtttattaagcgggatatgcagacagttaaacaggtg
cagcttatattgcaaacttatccgggtaataatcatgtatacttatattttccgcaggag
aaaaaattagcgaaaacctcggaaaactattgggttaatttggacagtgaagtggtcaaa
gaactggagcaggtacttggggtttctaacgtcaggataaagcaaaaagccccggctcaa
gaagcagtttctttataa
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