Desulfosporosinus acidiphilus: Desaci_1080
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Entry
Desaci_1080 CDS
T02148
Name
(GenBank) DNA helicase, Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dai
Desulfosporosinus acidiphilus
Pathway
dai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Desaci_1080
09124 Replication and repair
03420 Nucleotide excision repair
Desaci_1080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dai03021
]
Desaci_1080
03400 DNA repair and recombination proteins [BR:
dai03400
]
Desaci_1080
Enzymes [BR:
dai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Desaci_1080
Transcription machinery [BR:
dai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Desaci_1080
DNA repair and recombination proteins [BR:
dai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Desaci_1080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PhoH
Motif
Other DBs
NCBI-ProteinID:
AFM40119
UniProt:
I4D2U5
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All DBs
Position
1144983..1147361
Genome browser
AA seq
792 aa
AA seq
DB search
MKIVKVSVRDLVEFVLKRGDLQPASLGAARTQDGIKAHQYIQKHSGLNYLPEVTLSYLYV
PRENQYISGLDEEICLEVKGRADGIFKTESGVCVDEIKTTSMDLSLLEESISGMHWAQAQ
CYAFMYAVMESLENMEVQLTYYQLDTAETRKFNKWFTLEELAEFFFNLGERYLAWACRVQ
EWLIVRDESIHNLNFPFEAYRVGQRDLAVGVYQTIKHGEMLFAQAPTGIGKTMGTLFPAL
KAMSEGLTVQIFYLTAKTITRTVAERALSDLQNKGLKIKRLTLTAKRKVCFLPEVSCLPE
ECSYAKGYYDRLRGAVEDMFNEESWTRQVLEDHARKHSICPFEFSLEMALWADVVIGDYN
YVFDPRVYLKRFFLDGGEYTFLVDEAHNLVDRAREMFSAELVKEDWLKLKRLAKRDNPRL
SKSLNRVNTALGKEKNRCLAANSQGEFVEKGLPGSLIKVLRQFVKEVEVFLKSKAETYPW
QEQLLDLYFQTLTFLRTAESYDTRYVTCLQFREEFRVKLFCLDPAIRLREAFEKGKASIL
FSATLSPMDYFMNVLGGEETSFKLRLSSPFPAGNLHVMIHKSIPTKYKQRALSYEQIAET
IAAVIQPKVGNYLVFFPSYEYLQEVILRFRVQNPSVKVIQQTLGMLEEERENFLADFMKH
PEQTLVGFALMGGIFGEGIDLLGDRLSGAIIVGVGLPQIGFEREIIRAYYEKVSHEGFEF
AYMYPGINKVLQAVGRVIRTENDRGIVLLIDERFAQWKYKKLLPPEWKNIHYMTNTKAVR
ESVGKFWTETVH
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
ttgaagattgtaaaagtatccgtgcgagatttagtggaattcgtactaaaaaggggtgac
ttgcagccagcctcgctgggggctgctcgcactcaagatggtataaaagcccatcagtac
attcaaaaacatagcggtctgaactatctgcctgaagtaacactctcttatctttatgtc
ccaagggagaatcagtatataagtggacttgatgaagaaatttgcctggaagttaaagga
cgagcggatgggatatttaaaacggaatccggagtttgtgtcgatgagataaaaacgacg
tccatggatttatccttacttgaagaatccataagcggtatgcactgggcccaagcccag
tgttatgcctttatgtatgcagttatggaaagcttggaaaacatggaagttcagctcaca
tattatcaacttgacaccgctgaaacgagaaaatttaataaatggtttactttagaagaa
ctagcggagttcttctttaatttaggggaacgatatttggcctgggcttgtcgggttcaa
gagtggcttattgtccgcgatgaaagtattcataacctaaattttccctttgaggcttat
cgggtggggcaaagggatttggctgtcggcgtctaccagacgataaagcacggcgagatg
ctttttgctcaagctcccacaggcatcggcaagaccatgggtactctatttcctgccctg
aaggctatgtccgaagggttaactgtgcaaattttttacctcacggctaaaaccatcact
cgtaccgttgcggaaagggctttgtctgatttacaaaacaaagggttaaaaattaagcgg
ctgaccctaactgctaaaagaaaagtatgttttttgccggaggtttcctgtttgccggaa
gaatgttcctatgccaaaggttattatgaccgcctccgaggcgctgttgaggatatgttt
aatgaagaatcatggactcgccaggttcttgaagatcatgcccgtaaacattcaatttgt
cctttcgaattttcactggaaatggctctttgggcagatgtggttattggagattataac
tatgtatttgaccctcgtgtctatttaaaacgattttttctggacggaggggaatatact
tttttggtcgatgaagcccacaatttagtggaccgtgctcgtgagatgttttcggccgaa
ttagtgaaggaagattggctcaagcttaaacgactcgccaaaagggataatccaagactg
tctaagagtttgaaccgggtcaatactgccttaggcaaagaaaaaaaccgttgtctggct
gcaaattcccagggagaatttgttgaaaaagggcttcccggcagccttattaaggttttg
agacaatttgttaaagaagttgaagtttttttaaaatcaaaagcggaaacgtatccttgg
caggaacagcttttagatctttactttcagaccttaacgtttcttagaacagcggaaagt
tatgatacacgttatgtgacctgtctgcaatttcgggaagaatttagggtcaaactgttt
tgtctcgaccctgctatccggcttagagaagcgtttgagaaagggaaagcatcaatactg
ttttctgcaaccttaagtcctatggattattttatgaatgttttgggcggagaagagacg
tcgtttaaattaagattatcttccccctttcccgcaggaaacttacatgttatgattcac
aaaagcattcctactaaatataagcaacgagctttgagctatgagcagattgccgaaaca
atcgccgccgttattcagcctaaagtagggaactatctcgttttcttcccttcttacgaa
tatttgcaggaagttattctcaggtttcgagtgcaaaatccttcagttaaggttattcag
caaactttaggcatgcttgaagaggaacgggagaatttcttggcggattttatgaagcat
cctgagcaaacattagtaggtttcgctttaatgggcggcatctttggcgaaggaattgat
ttattaggtgatcgcctctcaggggctattattgttggagtgggcttgcctcagattgga
tttgaacgagagataatacgtgcttattacgaaaaagtaagtcatgaagggtttgaattt
gcctacatgtacccgggaattaacaaggttttgcaggcagtgggacgagtcatccgaaca
gagaacgataggggcattgttttactgattgatgaacgcttcgctcaatggaagtacaaa
aaattgcttccccctgaatggaagaacattcattacatgactaatactaaggctgttcga
gaatcagttggaaaattttggacagagacagttcactaa
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