Desulfatibacillum aliphaticivorans: Dalk_0774
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Entry
Dalk_0774 CDS
T00813
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dalk_0774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dal03400
]
Dalk_0774
DNA repair and recombination proteins [BR:
dal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dalk_0774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
HHH
GIY-YIG
HHH_2
UVR
HHH_3
5_3_exonuc
GIY_YIG_2
DUF4602
Motif
Other DBs
NCBI-ProteinID:
ACL02479
UniProt:
B8FHR2
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Position
1045725..1047536
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AA seq
603 aa
AA seq
DB search
MSEIEKKLATLSNGPGVYLMKDESGEIIYVGKARSLKKRVSSYFLEKPNRDLKTGILVKK
IASFDAILVTTEKEALILEANLIRKHKPRYNILLKDGKRFPSLRIDVRTSYPRLEVVRKV
KKDGAIYFGPFSSAGKLRSTLKIINKTFQLRKCKQKEPPKRNRPCLNYQMGQCLGPCCLP
VDRDEYLDMVNEVILFLKGRTNDLLQKIKEQMAAASERQEYELAARLRDRMFAIQATVEK
QAAVTTDFVDRDVIGIDREPEGSAISVLYIRGGFLLGSRNYNFDEVLGTDSESIQAFLRQ
YYDKDRFIPDEVFVPCQLENMELMEQWLTETAEKRVVLHWPQRGEKTRLIEMANENAHEA
LKDRISSENVFKSLLERLQKRLRMDRPPRRIECFDISHTGGNQTVASMIVFEDGKEAKSE
YRTFNIDSLDHPDDYAAMHEVMARRFSPDKDWPTPDVLLIDGGKGQLSITASVLDGLGVM
GAFEVISIAKKDEAKKETMDKIYRPGQANPVVFGRDGDVLLFLQRVRDEAHRFAITTHRK
KRAKTIRKSALDSVPGIGEKRKKALLRHFGSIKRLKEASPEDIAQVPGISVKRAQEILEA
LDA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaaatagaaaaaaaactggccacattatccaacggacccggggtgtatctcatg
aaggacgagtccggggagatcatctatgtgggcaaggccagaagcctgaaaaaacgggtg
tcctcctattttctggagaagcccaaccgggacctgaaaaccggcatcctggtcaagaag
atagcctcctttgacgctatcctggtgaccacggaaaaggaagctctgatcctggaagcc
aacctcatccgcaagcataagccccgctacaatatcctgttaaaagacggaaaacgcttt
ccctccctgcgaatcgacgtgcgcacgtcctatccgcgcctggaagtggttagaaaggtc
aaaaaggacggcgctatttatttcgggcctttttcgtcggcgggcaagctaagaagcacc
ttaaagatcatcaacaagacctttcaactccgcaaatgcaagcaaaaagagccgcccaaa
cgcaaccggccgtgcctgaactatcagatggggcaatgcctggggccttgctgccttccc
gtggaccgggacgaatacctggacatggtgaatgaggtgatcctgttcttaaaaggccgc
acaaatgatttgctccaaaaaatcaaggagcagatggccgccgcttccgaaaggcaggag
tacgaactggctgctcgcctgcgggatcgcatgtttgccattcaggccacggtggaaaaa
caggcggccgtgaccacggattttgtggaccgggacgtgatcggcatcgatagggagccg
gaaggttcggccatctccgtgctttacatccggggcggctttttgttggggtcccggaac
tacaactttgacgaagtcctgggcacggactcggaaagcattcaggcctttttacgccag
tattatgacaaggaccggttcatccctgacgaggtgttcgttccctgccaattggaaaac
atggagttgatggagcaatggcttaccgaaaccgcggaaaaacgggtggttcttcactgg
ccgcaacggggtgaaaaaacccgcctcattgaaatggccaacgaaaacgcccacgaagcc
ctcaaggaccgcatttcgtcggaaaatgtgttcaaaagcctgctggaaaggctgcaaaag
cgtctgcgtatggatcggccgccccggcgcatcgagtgctttgacatatcccataccggc
ggaaatcagaccgtggcttccatgatcgtctttgaggacggcaaggaagccaagtccgaa
taccgcaccttcaatatcgacagcctggaccacccggatgattacgcggccatgcacgag
gtcatggcgcggcggttttcgccggacaaggattggcccactcccgacgttctgttgatc
gacggaggcaaaggccagctttccattacggcgtccgttttggacggcctgggcgtcatg
ggcgcttttgaggtgatcagcatcgctaaaaaagacgaagccaaaaaggaaaccatggac
aaaatctaccgccccgggcaggccaaccccgtggttttcggccgggacggagacgtgctt
ttgttcctgcaacgggttcgggacgaagcccaccgcttcgccatcacaacccatagaaaa
aagcgggccaagaccattcgaaaatccgccctggatagtgtgcccggaataggggagaaa
cggaaaaaagccctgttgcggcatttcgggagcataaaacgcctgaaagaggccagcccc
gaggacatcgcccaggttccgggcatcagcgtcaaacgcgcccaggagatcctggaggct
ctggacgcctga
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