Desulfatibacillum aliphaticivorans: Dalk_3136
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Entry
Dalk_3136 CDS
T00813
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal00300
Lysine biosynthesis
dal00550
Peptidoglycan biosynthesis
dal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dalk_3136
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dalk_3136
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dal01011
]
Dalk_3136
Enzymes [BR:
dal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Dalk_3136
Peptidoglycan biosynthesis and degradation proteins [BR:
dal01011
]
Precursor biosynthesis
Amino acid ligase
Dalk_3136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACL04826
UniProt:
B8FBS3
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All DBs
Position
complement(3991996..3993591)
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AA seq
531 aa
AA seq
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MKLSRLIDGLKADQRNPVLEITGAQGDPDVISIQYNSRLVKPQGLFTAIKGNAVDGHIFV
QDAVKKGAAAVVTEEPVEAPIGVAVIRVKDSRRALANMASEFFGRPTEKLKLAGITGTNG
KTTVTYFAEAMLGAAGCKVGIVGTVSSRWPGHEKESSVTTPESLELQETLARMVDAGVTH
AIIEVSSHALTQSRPAFCQFDAGVFTNITQDHLDYHKDMESYFQAKRILFDDLLAASTKE
NKTAVINLDDPQGAVLCREVKTPVLCTGLTEGSSIRSIDVKAGADGLKGVMETPAGELVF
ESPAVGRHNLYNLMSAAGVGLAFGLSLEEVEMGLNAAVNVPGRLEKVENGLDRHVFVDYA
HTPDALENVLEALRRVSKAKIITVFGCGGDRDKGKRPKMGAAAARHSDLVVVTSDNPRSE
DPEAIIDDILPGISGEGAQRLNASYCMMCSRKSAFMVEPDRRKAILTAIMSSGPGDLVLI
AGKGHETYQIVKNGRFAFDDRVEARNALECLSRNIHSRQESPLSGRYVCSR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaagccggctcatagacggccttaaggccgaccagaggaaccccgtgctggag
ataacgggcgcccaaggcgatcccgacgtcatttccatccagtacaactcccggctggtg
aagccccagggcttgtttacggccatcaaaggcaatgccgtggacgggcacatttttgtg
caggacgccgtaaaaaaaggcgccgccgccgtcgtgacggaagaaccggtggaagccccg
ataggcgtggccgtgattcgggtcaaggactcccgcagggctttggccaatatggcttcc
gaatttttcgggcgtcctacggaaaagctgaaattagccggtattacaggcactaacggt
aaaacgaccgtcacctattttgcggaggccatgttgggcgccgcaggctgcaaagtaggc
attgtgggcaccgtaagcagccgttggcccggccatgaaaaggaaagcagcgtaaccacc
cccgaatccttggagcttcaagagaccctggcccggatggtggacgccggcgtgactcac
gccattatagaggtttcctcccacgcactgacccaaagccggccggctttctgccagttc
gacgcgggagtgtttacgaatattacccaggaccacctggactatcacaaggacatggag
tcctatttccaggccaagcggattttgtttgacgacttactggccgcgtccaccaaggaa
aacaagaccgccgtcatcaacctggacgacccccagggcgcggtcctgtgccgggaagta
aaaactccggttttgtgcaccggcttaaccgaaggcagcagcatccgaagcattgacgtc
aaggcaggagcggacggcctgaaaggcgtaatggaaactccggccggagaattggtgttc
gaatctccggcggttggcaggcacaatctttacaacctcatgagcgcggcgggcgtcggc
ctggctttcggcctgagcctggaggaggtggagatgggactgaatgcggcggtaaacgta
cccgggcgtttggaaaaggtcgaaaacggactggatcgccatgttttcgtggattacgcc
cacactccggacgccctggaaaacgtcctggaagcgcttcggagagtgtccaaggcgaaa
atcatcaccgtgttcggatgcggcggagacagggacaagggaaaacgccccaaaatgggc
gcagctgcagccagacacagcgacctggttgtggtgacctccgacaatccgagatcagag
gatcctgaggccattattgacgatatcctgccgggcatatcaggcgaaggcgcgcaaagg
ttgaacgcctcctattgcatgatgtgctcgcggaaatccgccttcatggtggagccggac
cggcgcaaggccattctgacagcgatcatgtcttccggcccgggagacttggtgttgata
gccggaaaagggcatgaaacctatcagatcgtcaagaacgggcgcttcgcctttgacgac
cgggtggaggcccggaacgccctggaatgtctgtccagaaacatccattccaggcaggaa
agccccctttccgggcgctatgtatgttcccgctga
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