Desulfatibacillum aliphaticivorans: Dalk_3822
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Entry
Dalk_3822 CDS
T00813
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dal
Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dal03019
]
Dalk_3822
Messenger RNA biogenesis [BR:
dal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Dalk_3822
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
HDOD
RMI2
A2M_bMG2
Motif
Other DBs
NCBI-ProteinID:
ACL05508
UniProt:
B8FC90
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All DBs
Position
complement(4818562..4819536)
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AA seq
324 aa
AA seq
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MTKTTFVENIQPGEKVQAVFAVTDKSVSHRKDGAPFLNLTLVDRTGSVRAIMWDLLPDTL
GSFDNGDYVAVMAQAGTYRDQLQLTIKALARTPDDEVDPSDFLPTCPTDPQKLFAKLKEL
TESIQDPFLNNLMNAFWEDEAFVKAFTAAPAGKKMHHAYIGGLAEHTLSVALLVDPLAGH
YVKNKGVNRDLLLVGAVLHDVGKVQEFQWKAAIDYSDAGRLMGHAVLGVRMLDEKIAGIP
DFPNETAMLLRHMIVSHHGEREFGAIETPKTLEAIILNNIDDLDAKVNGVRTFMDQEDNG
EVWTGYHRLMERYFYRGRKAGGDE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaacgacctttgtggaaaacatccagcccggcgagaaagttcaggctgttttc
gccgttaccgacaagtccgtctcccatcgcaaggacggggcgccgtttttgaacctcact
ctggtggaccgcaccggttcggtcagggctatcatgtgggaccttttgcccgacaccctg
ggctcttttgacaacggcgactacgtggctgtcatggctcaggccggaacttaccgggac
cagttgcagcttactatcaaggccctggccagaacgccggatgatgaggtggaccccagc
gattttctgcccacatgccctacggaccctcaaaaacttttcgccaagctcaaggagttg
acggaaagcatccaagatcctttcctgaacaatcttatgaatgccttctgggaggacgag
gcctttgtcaaagccttcacggcggcgccggccggaaagaaaatgcatcatgcatacatc
ggaggtttggccgaacacaccttgtccgtggctctgcttgtggaccccctggccgggcat
tacgtaaaaaacaagggcgtcaaccgggatcttcttctggtgggcgcggtgcttcatgat
gtgggcaaggtgcaggaattccagtggaaagcggccatagactactcggacgcggggcgt
ttgatgggccacgcagtcctgggcgtcaggatgctggacgagaaaattgccggcatcccg
gattttcctaacgaaacagccatgttgctcaggcatatgatagtcagccaccatggagaa
cgggagttcggcgccatagagacgcccaagaccctggaggccattatattgaataacatt
gacgacctggacgccaaggtaaacggagtccgcacctttatggaccaggaggataacggg
gaagtctggaccggataccatcggttgatggagcgctatttttaccgcggaagaaaggcg
ggcggcgatgagtag
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