Desulfatibacillum aliphaticivorans: Dalk_4741
Help
Entry
Dalk_4741 CDS
T00813
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dal
Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dal03016
]
Dalk_4741
Enzymes [BR:
dal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dalk_4741
Transfer RNA biogenesis [BR:
dal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dalk_4741
Prokaryotic type
Dalk_4741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ACL06419
UniProt:
B8FCY8
LinkDB
All DBs
Position
5857078..5858100
Genome browser
AA seq
340 aa
AA seq
DB search
MTGMQLEKGAVNHGIIVVDKPSGITSAKALDKVKKTLGVKKAGHTGTLDPFATGVLVCCL
GAATRLARFFLHGDKTYEAVMHLGIETDTQDLTGEVASRMEAEAAQVTPQQIREAAARFQ
GEIDQFPPVYSALKHQGVPLYKWARKGTPVQKDARRITIYSLDVTDINPPMAGFTARCSG
GAYIRTLCADIGRELGCGAHLHALRRTENSGFSIEEAVTLDQLEDLVQSGKINEHVAPMA
HALRQMPEYTASSQTAKKITHGAALTWLDLGEKTGRQDLQDNPKHIKVASQEGDLLAVLT
PKTDGIGFTYECVFPPTRPVGRMHSKGAPMLPNARNSFNS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcatgcagcttgaaaaaggggcggtaaatcacggaatcatcgtggtggacaag
ccgtccggaatcacctccgcaaaggctctggacaaggtcaaaaagaccttgggcgtcaaa
aaggcggggcataccggcaccttggacccgttcgccacgggcgtgcttgtatgctgcctg
ggcgcagccacccggctggccaggttttttcttcatggcgataaaacctatgaagcggtt
atgcacttgggcatcgagaccgacacccaggatttgaccggcgaagtcgcctcccgcatg
gaggctgaggccgcccaggttacgccccagcagatccgggaagccgcggccaggttccag
ggggaaatcgatcagtttccgccggtgtattccgcgcttaagcatcagggagttcctttg
tacaagtgggcgagaaagggaacccccgtgcaaaaggacgcgcggcgtatcaccatttac
tcgttggatgtgactgacataaacccgcccatggcgggtttcaccgcccgctgttcgggc
ggagcatatatcagaaccctttgtgcggacatagggcgcgaactgggctgcggagcccat
ctgcacgccttgcgccgtacggaaaacagcggcttttccatcgaggaggccgtgactctc
gaccagttggaagaccttgtccaatcgggaaaaatcaatgagcatgtcgcgcccatggcc
catgcattacgtcaaatgcccgaatatacagcgtcctcgcaaacggccaagaaaatcacc
cacggggcggccctcacatggctggaccttggagaaaaaacaggcaggcaagacctgcag
gataatcccaagcatatcaaggtggcttcccaggagggagacctgcttgccgtgcttacg
cctaaaacggatggcataggcttcacctatgaatgcgtctttcccccaacccgtcctgtg
ggaagaatgcattcaaagggcgcgcccatgctccccaacgcaagaaacagttttaacagt
taa
DBGET
integrated database retrieval system
