Desulfobacca acetoxidans: Desac_2325
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Entry
Desac_2325 CDS
T01454
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dao
Desulfobacca acetoxidans
Pathway
dao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desac_2325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dao03400
]
Desac_2325
Enzymes [BR:
dao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Desac_2325
DNA repair and recombination proteins [BR:
dao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desac_2325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
nSTAND3
PIF1
AAA
T2SSE
SLFN-g3_helicase
UvrD-helicase
AAA_22
AAA_29
AAA_28
AAA_16
HHH_2
NTPase_1
AAA_23
DEAD
ABC_ATPase
Rad17
AAA_33
RsgA_GTPase
AAA_12
Herpes_Helicase
FtsK_SpoIIIE
MeaB
Zeta_toxin
AAA_7
ABC_tran
Mg_chelatase
cobW
AAA_18
DUF3489
NACHT
Motif
Other DBs
NCBI-ProteinID:
AEB10149
UniProt:
F2NFN0
LinkDB
All DBs
Position
complement(2578987..2581149)
Genome browser
AA seq
720 aa
AA seq
DB search
MLVELQGQIERVTFFSEDTGFVVAQLKVRGQKHLVTIIGHLLAPKAGEGLRLKGEWSLHP
KYGEQFKFTEHETMTPATASGMKKYLSSGFIKGIGPVMAQRIVQKFGGQTFDIIETGIER
LAEVEGIGPKRRQMIQRAWEEQKQIREVMLFLQTHNISTAYAAKIFKQYGHQAVTVMQEN
PYQLAADIFGIGFLTADRIAMKLGFEKETPARLEAGILHTLKNVSNEGHVFFPYRPLLEK
AREILAVEEQLIVQALSRLAFRQEVVVEESLDQDQRPVYLSGFYLAETNAAKRLKALMQA
QQQLPFIEPAKALAWVQERLGLTLAPQQADAVTMSLRHKVLLITGGPGTGKTTIINAILK
IWERLGVNVMMAAPTGRAAKRMSEVTGWEAKTIHRLLQYSQQKGGFQVSEGKTLPCDLLI
IDEASMIDVVLLHHLLKATPRGATLILVGDANQLPSVGPGNVFRDLIASGTIPLVELTEI
FRQAQESLIIVNAHRINRGQLPQWKAEPDKLADFFFLEQEEPQEVLHLVLELVKERIPKR
FGFDPVEDIQVLTPMHRGVVGAGMLNQTLQRELNPDGPGLDRGGRMFKVNDKVMQIRNNY
DKDVFNGDIGRISRIDQEMQELTIIFENREVIYDFGELDEIVLAYAISVHKSQGSEYPAV
VLPMVTQHYLLLQRNLIYTAVTRGKKLVVIVGAKKALAMAIHNDKTKKRHSRLGARLAAG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggaacttcaggggcagattgagcgggtcacgttttttagtgaagacaccggc
tttgtggtagctcaactcaaggtgcgcggtcaaaaacatctagtgaccataatcggccac
ctgttggcgcccaaagcaggcgaggggctgcgtttaaagggagaatggagtctccacccc
aaatacggtgaacagttcaaattcaccgagcacgaaaccatgactccggctactgcctct
ggtatgaaaaaatatctgagttccggttttatcaagggaatcggaccggttatggcgcag
cgcatcgtccagaaattcgggggccagacctttgatatcattgagaccgggattgagcgg
ttggcagaagtagagggcatcggtcccaagcggcgccagatgatccagcgggcctgggag
gaacagaaacagatccgggaggtgatgctgttcttgcagacgcacaacatcagcaccgcc
tatgcagccaagatcttcaagcagtacgggcaccaggccgtcactgttatgcaggaaaat
ccttaccaactggccgccgatatcttcggcatcggttttcttaccgccgaccgcattgcc
atgaaattgggttttgaaaaagagactccggccagattggaggctggcatcctccatacc
ctaaagaacgtgagtaacgaaggacatgtattctttccctatcgaccgctgttggaaaag
gcccgtgagattctggcagtcgaggagcagttgattgtccaggcactcagccgtctggcg
tttcggcaggaggttgtggtcgaggagtccctggatcaagaccagcggcccgtctacttg
agcggtttttatctcgccgagactaatgccgccaaacgccttaaggccttgatgcaagcc
cagcagcagctcccttttatagagcctgccaaggccctcgcctgggtgcaggagcgtctg
ggcctcactctggcgccccagcaggccgatgccgttaccatgtctttgcgtcataaggtg
cttctcatcaccggcggtccgggtaccggcaagaccactatcatcaacgctattttgaag
atttgggagcgcttgggggtgaatgtcatgatggcggcgcccaccggtcgggccgccaaa
cgcatgagcgaggtcaccggctgggaggccaagaccattcatcggttgctgcagtatagc
caacagaagggtgggtttcaggttagcgaaggaaagaccttgccctgcgacctgctgatc
atcgatgaagcctccatgatcgatgttgtcctcctgcaccaccttttgaaggctacacct
cggggggccaccctcatcctggtaggcgacgccaaccaactgccatcggtgggtccgggc
aatgtcttccgcgacctgatcgcttccggcacaattcctttagtcgagctaaccgaaatc
tttcggcaggcccaggaaagcctgatcatcgtcaacgcccaccggatcaaccgcgggcag
ttgccgcaatggaaagccgagcccgacaaattagctgattttttcttcctggagcaggaa
gaaccgcaagaagtcctgcacctcgttctagaattggtcaaggagcgcataccgaagcgt
ttcgggtttgatccggtggaggatattcaggtccttacgccgatgcatcggggcgtggtg
ggggccggaatgctcaaccagactctgcagcgggaactcaaccccgacggtccgggactt
gaccgtggggggcgaatgttcaaagtcaatgacaaagtgatgcagatcaggaataactat
gacaaggatgtcttcaatggcgatatcggccgcatcagccgcattgaccaagagatgcaa
gaattaacgattatctttgagaaccgtgaagtaatatacgatttcggtgaattggacgaa
attgtcctggcctatgctatttcagtacacaaatctcaagggtcggaatacccggcggtg
gtgctgccgatggtaacccagcattatctgctgctgcagcgcaacctgatttatacggcg
gtgacacgcggcaagaagctcgtagtcatagtcggggccaagaaggcattggccatggca
atacataacgataagactaaaaaacggcactccaggctgggggcacggctggcggcaggg
taa
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