Dechloromonas aromatica: Daro_0113
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Entry
Daro_0113 CDS
T00259
Name
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dar
Dechloromonas aromatica
Pathway
dar00550
Peptidoglycan biosynthesis
dar01100
Metabolic pathways
dar01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Daro_0113
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Daro_0113
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dar01011
]
Daro_0113
Enzymes [BR:
dar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Daro_0113
Peptidoglycan biosynthesis and degradation proteins [BR:
dar01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Daro_0113
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AAZ44872
UniProt:
Q47JV9
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All DBs
Position
complement(129496..131406)
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AA seq
636 aa
AA seq
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MGDFNNPEADLDRFRFRIGFAAVTVLLAFGVLIGRFVWLQVIQHDFYQTRAEDNRIALIP
IVPNRGVITDRNGVVLAHNYSAFTLEITPSQAGDLEATIDSLAEVIDIQPKDRKRFKRLL
DEAKNFESIPIRTRLTDGEVAKFAAHRYRFPGVEVKARLFRQYPLANIASHAIGYIGRIT
ERDLKWIEESEKQANYKGTDHVGKTGLEQHYEFELHGETGYEEVEIDAGGRALRSLKRIP
PVSGNNLALTLDAKLQEITELAFGERKGSLVAIDPSTGGILALVSNPTYDPNLFVDGITP
DNWKELNEHPSKPMVNRAINGAYPPGSTFKPFLALAALEMGKRTPNQTINDPGYFNFGNH
QFRDDKKGGHGSVDMYKSIVHSCDTYYYMLANDMGIDNIAKFMGSLGLGQRTGVDLGKDD
SGESKGVLPSQEWKKQRFKKPEQQRWYAGETISIGIGQGYNAYTPIQLAQATATIANNGV
MFRPHLVHYIIDTKTGEKRQVEPKPIRDLNLRPQNIDVIRRAMVGVNKEGTGARAFAGAP
YESAGKTGTAQVFSLKGAQYKEGGMKKELRDHALFIAYAPADKPKIALAVLVENGGFGAQ
SAAPIARMVIDYYLLGKLPGGAAKDDPAAIEEDSEE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgatttcaataatccggaagccgatctcgaccgttttcggtttcggatcggtttt
gcggcggtaaccgtcctgctggcctttggcgtgctgattggccgcttcgtctggctacag
gtcatccagcacgatttttaccagacccgcgccgaagacaaccgtattgcgctgatcccc
attgtgcccaaccgtggcgtcatcaccgaccgcaacggtgtagtgctggcccacaactat
tcagccttcacactggaaatcacgccatcccaagccggtgacctcgaggcaaccattgat
tcgttggcagaagtcatcgatatccagcccaaggaccgcaagcgcttcaagcgcctgctc
gacgaagccaagaatttcgaatcgatccccatccgcacccgcctgaccgatggcgaagtc
gccaagtttgcggcacaccgctatcgtttccccggtgtcgaggtcaaagcccgactgttc
cggcaatacccgttggccaacatcgcctcgcacgccattggctacattgggcgaatcacc
gaacgcgacctgaaatggatcgaggagtcggaaaagcaggccaattacaagggcaccgat
cacgtcggcaagacaggcctcgaacagcattacgaatttgaactgcacggcgagaccggc
tacgaggaagtcgaaatcgatgccggtggccgggccctgcgcagcctgaaacgaattccc
ccggtttccggcaataacctggcactgacgctcgatgccaaattgcaggaaatcaccgag
ctagccttcggcgagcgcaaaggctctcttgtggccatcgacccgtcaaccggcggcatt
ctcgcgctcgtctccaatccgacctacgaccccaacctgttcgtcgacggtattacaccg
gacaactggaaggaactgaacgagcaccccagcaagccaatggtcaatcgagcgatcaac
ggagcctatccgccaggctcgactttcaagcccttccttgcactggctgcgctggaaatg
ggcaagcgcacgccgaatcaaacaatcaacgaccccggctatttcaacttcggcaatcac
cagttccgcgacgacaagaagggcggccacgggagcgtggacatgtacaaatccatcgtc
cattcctgcgacacctactattacatgctggccaacgacatggggatcgacaacatcgcc
aagttcatgggctcgctcggcctcggccagcgcaccggcgtcgatctcggcaaggatgat
tccggtgaatccaaaggcgtcctgccctcgcaggagtggaagaagcaacgtttcaaaaag
cctgaacagcagagatggtatgccggcgagacgatctcgatcggcatcggccaaggctac
aacgcttacacgccgatccagctggcccaggccaccgcgactatcgccaataatggcgta
atgttccggccgcacctggtgcattacatcatagacaccaagacgggcgaaaagcggcag
gtcgaaccaaagccgatccgcgacctcaatctcaggccgcagaatatcgatgtcatccgc
cgcgccatggttggcgtaaacaaggaaggcacgggcgcccgggcctttgccggcgcacct
tacgaatcagccggcaagaccggcaccgcgcaggtcttctcgctaaagggtgcccagtac
aaagaaggcggcatgaaaaaagaactgcgcgaccacgcgctgttcatcgcctatgccccg
gccgacaaaccgaaaatcgccttggctgtactggttgagaacggcggcttcggcgcccag
tcagccgcgcctatcgcccgcatggtcattgactactatctgctcggcaagttgccgggc
ggtgccgccaaagatgacccagccgccatcgaagaggatagcgaggaatga
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