KEGG   Dechloromonas aromatica: Daro_0113Help
Entry
Daro_0113         CDS       T00259                                 

Definition
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
dar  Dechloromonas aromatica
Pathway
dar00550  Peptidoglycan biosynthesis
dar01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:dar00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Daro_0113
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Daro_0113
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:dar01011]
    Daro_0113
Enzymes [BR:dar01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Daro_0113
Peptidoglycan biosynthesis and degradation proteins [BR:dar01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   Daro_0113
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Transpeptidase PBP_dimer
Motif
Other DBs
NCBI-ProteinID: AAZ44872
UniProt: Q47JV9
LinkDB All DBs
Position
complement(129496..131406)
Genome map
AA seq 636 aa AA seqDB search
MGDFNNPEADLDRFRFRIGFAAVTVLLAFGVLIGRFVWLQVIQHDFYQTRAEDNRIALIP
IVPNRGVITDRNGVVLAHNYSAFTLEITPSQAGDLEATIDSLAEVIDIQPKDRKRFKRLL
DEAKNFESIPIRTRLTDGEVAKFAAHRYRFPGVEVKARLFRQYPLANIASHAIGYIGRIT
ERDLKWIEESEKQANYKGTDHVGKTGLEQHYEFELHGETGYEEVEIDAGGRALRSLKRIP
PVSGNNLALTLDAKLQEITELAFGERKGSLVAIDPSTGGILALVSNPTYDPNLFVDGITP
DNWKELNEHPSKPMVNRAINGAYPPGSTFKPFLALAALEMGKRTPNQTINDPGYFNFGNH
QFRDDKKGGHGSVDMYKSIVHSCDTYYYMLANDMGIDNIAKFMGSLGLGQRTGVDLGKDD
SGESKGVLPSQEWKKQRFKKPEQQRWYAGETISIGIGQGYNAYTPIQLAQATATIANNGV
MFRPHLVHYIIDTKTGEKRQVEPKPIRDLNLRPQNIDVIRRAMVGVNKEGTGARAFAGAP
YESAGKTGTAQVFSLKGAQYKEGGMKKELRDHALFIAYAPADKPKIALAVLVENGGFGAQ
SAAPIARMVIDYYLLGKLPGGAAKDDPAAIEEDSEE
NT seq 1911 nt NT seq  +upstreamnt  +downstreamnt
gtgggtgatttcaataatccggaagccgatctcgaccgttttcggtttcggatcggtttt
gcggcggtaaccgtcctgctggcctttggcgtgctgattggccgcttcgtctggctacag
gtcatccagcacgatttttaccagacccgcgccgaagacaaccgtattgcgctgatcccc
attgtgcccaaccgtggcgtcatcaccgaccgcaacggtgtagtgctggcccacaactat
tcagccttcacactggaaatcacgccatcccaagccggtgacctcgaggcaaccattgat
tcgttggcagaagtcatcgatatccagcccaaggaccgcaagcgcttcaagcgcctgctc
gacgaagccaagaatttcgaatcgatccccatccgcacccgcctgaccgatggcgaagtc
gccaagtttgcggcacaccgctatcgtttccccggtgtcgaggtcaaagcccgactgttc
cggcaatacccgttggccaacatcgcctcgcacgccattggctacattgggcgaatcacc
gaacgcgacctgaaatggatcgaggagtcggaaaagcaggccaattacaagggcaccgat
cacgtcggcaagacaggcctcgaacagcattacgaatttgaactgcacggcgagaccggc
tacgaggaagtcgaaatcgatgccggtggccgggccctgcgcagcctgaaacgaattccc
ccggtttccggcaataacctggcactgacgctcgatgccaaattgcaggaaatcaccgag
ctagccttcggcgagcgcaaaggctctcttgtggccatcgacccgtcaaccggcggcatt
ctcgcgctcgtctccaatccgacctacgaccccaacctgttcgtcgacggtattacaccg
gacaactggaaggaactgaacgagcaccccagcaagccaatggtcaatcgagcgatcaac
ggagcctatccgccaggctcgactttcaagcccttccttgcactggctgcgctggaaatg
ggcaagcgcacgccgaatcaaacaatcaacgaccccggctatttcaacttcggcaatcac
cagttccgcgacgacaagaagggcggccacgggagcgtggacatgtacaaatccatcgtc
cattcctgcgacacctactattacatgctggccaacgacatggggatcgacaacatcgcc
aagttcatgggctcgctcggcctcggccagcgcaccggcgtcgatctcggcaaggatgat
tccggtgaatccaaaggcgtcctgccctcgcaggagtggaagaagcaacgtttcaaaaag
cctgaacagcagagatggtatgccggcgagacgatctcgatcggcatcggccaaggctac
aacgcttacacgccgatccagctggcccaggccaccgcgactatcgccaataatggcgta
atgttccggccgcacctggtgcattacatcatagacaccaagacgggcgaaaagcggcag
gtcgaaccaaagccgatccgcgacctcaatctcaggccgcagaatatcgatgtcatccgc
cgcgccatggttggcgtaaacaaggaaggcacgggcgcccgggcctttgccggcgcacct
tacgaatcagccggcaagaccggcaccgcgcaggtcttctcgctaaagggtgcccagtac
aaagaaggcggcatgaaaaaagaactgcgcgaccacgcgctgttcatcgcctatgccccg
gccgacaaaccgaaaatcgccttggctgtactggttgagaacggcggcttcggcgcccag
tcagccgcgcctatcgcccgcatggtcattgactactatctgctcggcaagttgccgggc
ggtgccgccaaagatgacccagccgccatcgaagaggatagcgaggaatga

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