Desulforapulum autotrophicum: HRM2_p00730
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Entry
HRM2_p00730 CDS
T00861
Symbol
polC
Name
(GenBank) predicted type III DNA polymerase PolC
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat03030
DNA replication
dat03430
Mismatch repair
dat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRM2_p00730 (polC)
03430 Mismatch repair
HRM2_p00730 (polC)
03440 Homologous recombination
HRM2_p00730 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dat03032
]
HRM2_p00730 (polC)
03400 DNA repair and recombination proteins [BR:
dat03400
]
HRM2_p00730 (polC)
Enzymes [BR:
dat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRM2_p00730 (polC)
DNA replication proteins [BR:
dat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HRM2_p00730 (polC)
DNA repair and recombination proteins [BR:
dat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HRM2_p00730 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ACN18067
UniProt:
C0QMS3
LinkDB
All DBs
Position
pHRM2a:complement(63617..64489)
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AA seq
290 aa
AA seq
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MEFVSIDVETANPDMASICQIGIACFNNGQLEREWSSLVNPRDYFDPINVSVHGINETSV
SSAPSFEEIYHEIRSLLSGKICVSHTHFDRISMDKAIRKHSLDPIDVVWLDSARIARRAW
EECAWKGYGLANVCKIIGFEFKHHDALEDAKACGAIVHAAVEKAGLTLEGWLTRVGQPIS
GLSSSGGKVALEGNPEGELYGQSVVFTGALSIPRKDAAAMAASIGCSVAPTVSKKIDYLV
VGDQDASRLAGKDKSSKHIKAEKLIASGVQIRILKESDFKELVDGAARNA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgtatctattgacgttgaaactgcaaacccagatatggcctcaatttgtcag
attggtatagcttgcttcaataatggccagcttgagcgtgaatggtcatcccttgtaaat
cctagagactactttgatccaatcaatgtgagcgtacatggaattaacgagacgagtgtt
tcatctgcgccttcatttgaagaaatctatcatgagattaggtctctgttgtcagggaaa
atatgcgttagccatacgcacttcgatcgaatttctatggataaagccatccgaaagcat
tcgctcgaccccatcgatgttgtatggctcgattcagcgcgtattgctcggcgtgcctgg
gaggagtgcgcctggaagggttacggacttgccaacgtttgcaaaataatcggatttgag
tttaagcatcatgacgctcttgaggatgccaaggcatgcggcgcaatcgttcacgctgct
gtcgagaaggctgggctaacgctcgaagggtggctgacacgggttgggcagccaatatct
ggattatcctcatcgggtggaaaagttgctttggaggggaatccagagggtgagctatac
ggccaatccgtcgtattcactggggcgctttcaattccgcgtaaagatgctgccgctatg
gcggcgagtattgggtgctcagtagccccaacggttagcaagaaaattgactatttggta
gttggtgatcaagatgcatcaagacttgcaggcaaagataaaagctcaaaacatatcaag
gcggaaaagctcatagctagcggtgttcaaatcagaattttgaaagaaagtgacttcaaa
gaactggtagatggtgcggctagaaatgcctaa
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