Daucus carota (carrot): 108199551
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Entry
108199551 CDS
T05350
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108199551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108199551
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108199551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
108199551
NCBI-ProteinID:
XP_017222906
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All DBs
Position
8:29861837..29869254
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AA seq
781 aa
AA seq
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MASEMAETDREGIDGVRMTWNSWPRTKVESSKCVIPIAASISPIRSHPDILTLPYAPLRC
KTCSAILNPFARVDFAAHIWICPFCFQRNHFPHHYSAISETNVPAELYHQYTTIQYSLTP
IEDHKVGPTQMGVGQGGANSMRPPVFVFVLDTCMIDEELGYAKLALQQAIGLLPENALVG
FVTFGTQVQVHELGFGDMSKVYVFRGSKEMGKDQVLDQLGLGRRSAGGVYGKGGQAGGFD
SGIHRFLLPASECEYTFTSLLEELGTDLWPVPPGNRSLRCTGVALSVASGLLGACLPGTG
ARIIALVGGPCTEGPGSIVSKDLSEPVRSHKDLDKDAAPYFRKAVMFYEELAKQLVSQGH
VLDLFASALDQVGVAEMKVVIERTGGLVVLSESFGHSVFKDSFRRVFEDGEQSLGLCFNG
TLEINCSKDIKIQGILGPCTSLEKKGPAVAGTVIGQGNTTAWKLCGLDKTTCLTVFFDIS
SSEKPDPSGNINPQLYIQFLTSYQSPDCQQKLRVTTITKRWTDGAIGSEDLVQGFDQETA
AVVIARLTSHKMEMEEGFDATRWLDRNLIRLCSKFGDYRKDDPTSFTLNPLFSLFPQFMF
NLRRSQFVQVFNNSPDETAYFRMLLNRENIPNSLVMIQPSLISYSFNALPEAVLLDVASI
GADRILLLDSYFSIVIFHGMTIAQWRNMGYQNQAEHQAFAQLLQAPHNDSKLIIGERFPV
PRLVVCDQHGSQARFLLAKLNPSATYNNASEMAAGMDVIFTDDVNLQVFIEHLQRLAVQS
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaaatggcagaaaccgatcgcgagggcatcgacggcgtccgcatgacctgg
aactcatggcctcgcaccaaagtcgaatcctccaaatgcgtcatccccatcgcggcttcc
atctctccgatccgatctcacccagatatcctcaccctcccgtacgcccctctgcgttgc
aagacgtgctcggcgattctaaacccttttgcccgcgtggatttcgcggctcatatttgg
atctgccccttttgtttccagcgcaaccatttcccccatcactactccgccatctcggag
accaatgtgccggcggaattgtaccatcagtacaccacgattcaatactctctgaccccg
attgaggatcacaaggtgggtcccacccagatgggggtgggccagggcggggcgaattcg
atgaggccgccggtgtttgtgtttgtgttggacacgtgtatgattgatgaggaattgggg
tatgcgaaattggccttacagcaggcgattgggttgttgcctgagaatgcgttggtgggg
tttgttactttcggcacgcaggtgcaggtgcatgaattggggtttggggatatgtcgaaa
gtttacgtttttagggggtccaaggaaatggggaaagatcaggtcttggatcagttgggg
ttaggtaggaggagtgctggtggtgtttatggtaaaggtggacaggctggggggtttgat
agtggcattcataggttccttttgcctgcttccgaatgcgagtatacgtttacctcgttg
ttagaggagttgggtacagatttgtggccagttccacctggtaatagatctttacggtgt
acgggagtggcacttagtgttgcttcaggattgcttggagcttgtttgcctggtaccggt
gcacggataattgctcttgtcggtggtccatgtacagaaggacctggctcgattgtatca
aaggatctgtctgaaccagttcggtcccataaagatttagacaaggatgcagcaccttat
tttaggaaagctgtcatgttctatgaagaacttgcaaagcagcttgttagccaggggcat
gtgttagacctttttgcttctgcacttgatcaggttggtgttgccgagatgaaagttgtc
attgagagaacaggcgggcttgttgttctatccgaaagttttggacactctgtttttaaa
gattcttttaggcgtgtttttgaagatggtgaacagtcgctagggctctgtttcaatggc
acacttgagatcaattgttcaaaagatataaagattcaggggattcttggtccttgtacg
tctctggaaaagaaaggacctgctgttgcaggcacagtcattggacaggggaatactact
gcctggaagttgtgtggcctagataaaactacttgcttgactgttttctttgacatatca
tctagtgagaaaccagatccttctggaaatatcaatccacagttgtacatacagttcctt
acaagttatcagagccctgattgtcaacagaagctgcgtgtaacaaccataactaaacga
tggacagatggtgctattgggtcggaggacttggtacaaggatttgatcaagaaacagct
gccgtagtgattgcaagattgacctctcataaaatggaaatggaggaagggtttgatgca
acacggtggttagatcggaaccttatccgtctatgctccaagtttggcgactaccgcaaa
gatgatcccacatcatttaccttgaaccccttattttcattgtttcctcagtttatgttt
aatttgagaagatcacaatttgtgcaggtatttaacaatagtccagacgagaccgcctat
tttcggatgttgttaaaccgggaaaatatacccaactctcttgtcatgatacaaccatca
ctcatatcttattcatttaatgcacttcctgaagcagttctattggatgttgcatcaatt
ggtgcagatcgtattcttttgttggactcatattttagtatagttatatttcatggaatg
acaatagctcaatggagaaacatgggttaccagaaccaggctgaacaccaggcatttgca
caattgttgcaagctcctcataatgattctaaactaatcattggtgagcgttttcctgtt
ccaagattggtggtctgcgatcagcatggatctcaggcaagatttctattggcaaagtta
aatccatcagcaacatataataatgcttctgaaatggcagctggtatggacgtaattttc
accgatgacgtaaatctccaggtgttcattgaacatcttcagaggttggcagtgcagtct
tcttga
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