Daucus carota (carrot): 108201219
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Entry
108201219 CDS
T05350
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial-like
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108201219
Enzymes [BR:
dcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108201219
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
108201219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
DnaB_C
Toprim
Toprim_2
AAA_25
Toprim_3
AAA_29
Helic-prim_T7_N
Motif
Other DBs
NCBI-GeneID:
108201219
NCBI-ProteinID:
XP_017225001
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All DBs
Position
1:4978838..4993578
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AA seq
676 aa
AA seq
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MYTNSMSLHISSHISTPVLKTQALNSVPTCSNFIFNAFPAKPISIFTNLSLKTCAISSTP
NGTVVNSVKVVKPEVEVQSDNKLIILNEKLMKLGIDSGHCNPGEYYGMLCPKCKGGDTGE
QTLSLFITKDGDAALWTCFRAECGWKGSTQTLPNKSSNGKMYKIAKPKEIRQLTEQRLDL
QPLCSEIRAYFSERMISEETLQRNLVMQKTYGDQIAIAFTYRRNGKLISCKYRDVNKKFW
QESNTEKILYGVDDIRGASEIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSVSKNSLPSK
EEDLKYQYLWNCREYLEKASRIILATDGDQPGQALAEELARRLGRERCWKVKWPKKDENS
HFKDANEVLMFRGPEVLRGAIENAEVYPIKGLFSFADFFDEINAYYYQTLSYQLGVSTGW
KALDQYYNVVPGELTIVTGVPNSGKSEWIDALLCNLCESFGWKFALCSMENKVREHARKL
LEKHVKKPFFDARYGESAERMSAEEFEQGKQWLSDTFSLIRCDNECLPNIDWVLDLAKAA
VLRHGVNGLVIDPYNELDHQRPPNTTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLHN
WVGAAPNLYDISGSAHFINKCDNGIVIHRNRDPAAGPLDTVQVCVRKVRNKVAGTIGEAF
LSYNRVTGEYVDIDDI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaaacagtatgagcttacatatctcttcccacatttcaactcctgtcctaaaa
acacaagcacttaactcagtacccacttgctcaaacttcatttttaatgcttttcctgca
aaacccatctccattttcaccaatttatctctgaaaacatgtgcaatttcttctactccc
aatggcactgttgttaattcagtgaaagtggtaaaaccagaagtggaagtacagagtgac
aacaagctgataatactgaatgaaaaattgatgaagcttggaattgacagtggtcattgt
aatccaggggaatactatggcatgctttgtcctaagtgcaaaggtggggatactggagag
cagacattatcattgttcatcaccaaggatggggatgcagctttgtggacatgctttcga
gctgaatgtggttggaaaggcagcacacaaactttgccaaacaagtcaagtaatgggaag
atgtacaaaatcgccaaacctaaggaaataaggcaattaacagagcagagattggattta
caacctctttgcagtgagatacgtgcatatttttccgagagaatgatatcggaggagaca
ttacagagaaacttggtgatgcaaaaaacatatggtgatcagattgctattgcttttaca
tatcgaagaaatgggaagctcattagctgcaaatatagagacgtcaacaaaaagttctgg
caggagagtaataccgaaaagatattatatggagttgatgatattagaggagcaagtgaa
atcatcattgttgaaggtgaaatggacaagcttgcaatggaagaagctggcttccgaaat
tgtgtgagtgtccctgatggcgcccctccatcagtttccaaaaacagtttgccgtctaaa
gaggaggacttgaagtatcaatatttatggaattgcagagagtatcttgaaaaggcatct
cgaataatacttgcgactgatggagatcagcctggtcaagccttagctgaagaacttgca
cgccgtcttggaagggaaagatgctggaaagttaaatggccaaagaaagatgaaaacagt
catttcaaagatgcaaatgaggtactcatgtttaggggaccagaggtactaaggggagcc
attgagaatgcagaggtatatccaatcaaaggattatttagctttgcagatttctttgat
gaaatcaatgcatactattatcaaaccctcagttatcagcttggtgtttcaaccggatgg
aaggctcttgaccaatattacaatgtcgtacctggagagttaactatagttaccggagtt
cccaattcgggtaagagtgagtggatcgatgctcttttatgcaatctctgtgagagtttt
ggttggaaatttgcgctgtgctctatggagaataaggttcgagagcatgcacggaagctc
ctagaaaaacatgtgaagaagcctttctttgatgcaaggtatggggaatctgctgaaaga
atgagtgctgaggagttcgaacaaggcaagcagtggttaagtgatactttctctctcatc
cggtgtgataatgaatgtcttccaaacatagactgggttcttgacctggcaaaagcggca
gttctacgtcatggggtgaatggacttgtcattgatccatacaatgagcttgatcaccaa
cggcctccaaacacgacagagacagaatacgtgagtcagatgcttaccaaggtcaagcga
tttgctcaacatcattcctgtcatgtttggtttgtagcacatccaagacagttgcataat
tgggtcggggcagccccaaatttgtatgacatcagtggaagtgcccactttataaacaaa
tgtgataatgggattgttattcatcgtaacagggatccagcagctggacctcttgatact
gttcaggtatgtgtgcgaaaagtacggaacaaagttgctgggacaattggtgaagctttt
ttgtcatataatagggtaactggtgaatatgttgatattgatgatatatga
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