Daucus carota (carrot): 108202501
Help
Entry
108202501 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108202501 isoform X1
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Helitron_like_N
Pif1_2B_dom
Herpes_Helicase
RepSA
ATPase_2
AAA_16
AAA_30
NB-ARC
UvrD_C_2
AAA_22
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
108202501
NCBI-ProteinID:
XP_017226412
LinkDB
All DBs
Position
9:2098002..2106581
Genome browser
AA seq
1811 aa
AA seq
DB search
MEQARKYMSKSESLLSKIFNYEIPKMKEYVHEPKDEAYFHKLIQECHRERQQTSQGALPA
TTVDKKAHCITPTAPLVEVPHIYIWICHSAAQENFRFADSSVPPQMHRKDGLHARNKNFS
PPKPDQIKKKCRRNPLSTISSNDLLLNRTNNMRSGDLLKNMPYPEHLRGLMVENAPIPQS
HNRTASDPFITPIQPYARQKAKLNKKAESNISKRPDSHKFKTKVQPVPPSLHTQQRKAVR
KRNIHDKGKRYAHNSTEGIKIVKCGVASPASTDQLPNQDFDSDVSDFYSDKDFGDDLFDN
SFQFQSEIGSSTYSNTRKEVESISRKLDFDLNQKDSSTSEQFHDLEYSYIADMCSDQSDG
DSEDDYADDINYETYEVLEKAKKVVKEYATLGAPNVQCDKCHAWMWKEERVNKSVVKGKP
VFSICCAKGQIQLPKEKPTPSYIWQLHNDKKKAQRFKDGIRLYNSLFAFTSTGGKVDHSI
NNGGAPYVYRLNGQNHHLFGSLIPDEGDEPKFCQLYIYDTENEISNRLRWVNADDGDNVD
AEIVEGLMKMLDETNELVKEFRSARDRYEKHGVQDLEIILKVSRSESGRENHITPSDEVA
GIMVGDMDDTDGVRDIIINSKIKGLERITDIHPKLMALQYPLLFPHGCDGFHKEIPFGTS
QNMAQKRREMITMKEYYSYKLQVRTNQAMTPRLGGRLYQQYIVDAFSSIEQARLWWFRTH
QTTLRTDLYTNVKNSMTSGNSDTSNMGKGFILPSGFVGSRRYMQQNFQDALAVCRYIGHP
DVFLTMTTNPVWDEIMEMMKLIPHCSPQNSPDVIARVFHLKLQQLVDDIKKKNYFGTCLG
VMYVVEFQKRGLPHVHMLIWLDSASKLNLQANVDKYVSAEIPDEKIDPVGHAAVKAFMMH
GPCGKEFPKSPCMKQFKCTRHFPKKFCQATTFDQSGFPIYKRRQTNITVKKGKADLDNQW
VVPYNRDLLVRYQCHMNVEICAHARSLKYLFKYCLKGHDRATVEIRGKKQRPNNGDLLDQ
NEDEIQSFFDGRYICACEAAYRIFGFNIHYRSLAVERLSFHLEGQKQCTFRSNEPLEKIA
EREKERHTQLEAYFILNSTDTNAKKFLYDEIPQYYVWNDVDRIWTTRKRGKKIGRLSYTH
HSAGELWYLRLLLTKVRGATSFEHLRTVKGTIYSTFHEACKEYGLLDDDSEWDQVLQECS
VSGFPQQIRQLFVHIMVNCKVSDLNSLWNNHWKNMVDDILLNQRRITGNPLLILNEKQQQ
FYALAEIHNLLKTIGKSIKEFNQLPQPPNSYLDCSVNNLIIEETSYNITDMKKEYEQLFA
SCNKEQLEVYHAVMESVEKNEGGVFFIYGSGGCGKTYLWRTLISKLRSECKIVLPVASSG
IAATLMPGGRTAHSRFKIPIVLDEYSMCSISHTSDIAELIKKTSLIIWDEAPMQHRYSFE
CLDRSLRDIMKAVDPKRFHMPFGGITIVLGGDFRQILPVIPLAGRGEIVGASITRSKLWK
LASVYKLHHNMRLNKGNNREEIEALTHFAQWVLDIGDGKVGRPTNNNKEYGEDDIAVPKK
FCNLDSDNSVDQMIHNTFPNFWENYQDPDYLSERAILTPTNQTVGNVNSIIVEKIPGEMS
SYYSLDTAEDYPGTQREQLASFPPEYLNSLNIPGLPLHELKLKVGVVVMLMRNLNQTLGL
CNGTRMMVTKCLQFCVECEVIAGQFKGTKHFIPRMELCPTETRLPFKLCRKQMPLQVCYA
MTINKAQGQSLERVGLFLPKGVFTHGQFYVAVSRVTSPQGLKLFIDDENGNSTYITQNVV
YKEVFYNLPVI
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagctaggaaatatatgtctaaatctgagtcattactctctaaaatttttaat
tatgaaattcccaaaatgaaagagtatgtacatgagcctaaagatgaagcttatttccac
aagctcattcaagaatgtcatagagaaaggcaacagacttctcaaggagctttacctgcg
acgaccgtggataaaaaagcccactgcataactcctactgcaccactggtggaggttcct
cacatttacatttggatttgtcattcagccgcccaagaaaattttaggtttgctgacagt
tcagtgcctccacaaatgcacagaaaagatggtctacacgctcggaacaaaaatttctca
ccgcctaagccagatcagataaagaagaaatgcagacggaatcctttatccactatatcc
agtaatgatttgttacttaacaggacaaataatatgcgcagtggagatttattaaaaaac
atgccataccccgaacacttaaggggtctaatggttgagaatgctccaattccacaatct
cacaatcgtaccgcttccgaccctttcatcacgcccattcaaccttatgcaagacagaaa
gccaaactgaataaaaaagcagaatcgaatatttccaagcgtcctgattcacataagttt
aaaacaaaagtacagccagtgcccccatctttgcatactcaacaaaggaaagccgtgcgc
aaaaggaatattcatgataaagggaagaggtatgcacataactctacagaaggtataaag
attgttaaatgtggtgttgcctctcctgccagcacagaccaattgcccaatcaagatttt
gatagtgatgttagtgacttctattcagataaagattttggtgatgatctctttgacaat
tcattccaattccagtctgagattggatccagtacttatagcaacaccagaaaagaagtt
gaaagcatttcacgcaaattggattttgatttgaatcaaaaagattcaagcacttctgag
caattccacgacctcgaatattcttacattgctgacatgtgcagtgatcaaagtgatggt
gactctgaagatgattatgctgatgacatcaattatgagacttatgaggttttggaaaag
gcaaaaaaagttgtcaaagagtatgccacccttggtgctccaaatgttcaatgtgataaa
tgtcatgcttggatgtggaaagaggaacgtgtaaataagagtgttgtcaagggtaaacct
gtcttctccatctgttgtgcaaagggtcaaattcaacttcccaaggagaagcccactcct
tcttacatctggcagctgcataatgataagaaaaaagctcaaaggttcaaggatggcatc
cgtttatacaatagtctgtttgcgttcacatctaccgggggaaaagttgatcacagtatt
aataacggaggagcaccttatgtttatcggttaaacggacagaaccaccacctttttggt
tcccttatacctgatgagggtgatgaaccgaaattctgccagttatatatttatgatacc
gagaacgaaattagtaatcggcttagatgggtaaatgccgatgatggtgataatgttgat
gctgaaattgttgaaggattaatgaagatgttagatgaaactaacgaattggtcaaggaa
tttaggtcagcccgcgacagatatgaaaagcatggtgttcaagatttggaaataatccta
aaagtttctaggtctgagagcggtcgagaaaatcatatcaccccgtcagatgaggttgct
ggcataatggtgggtgacatggatgatactgatggagtacgtgatattatcataaattct
aaaataaaaggcttggaaaggataactgatattcaccctaaactcatggcactacaatat
cctctgctttttcctcatggctgtgatggttttcataaggaaatcccgtttggcacaagt
cagaacatggcacagaagcgaagagagatgattacaatgaaagagtattattcatacaaa
ctgcaagtgcgtactaatcaagcaatgacaccacgtcttggtggtagactttaccagcaa
tatatagttgatgctttctcaagcattgagcaagcccgtctctggtggtttcgcacccac
caaaccaccttgcgtactgatctatataccaacgtgaagaactctatgacatcaggtaat
tcggacacttcaaatatgggaaaaggatttattttaccctctggatttgttggatcaaga
aggtacatgcagcagaatttccaagacgcactagctgtatgtcgatatatcggacaccca
gatgttttccttacaatgaccacaaatccagtttgggatgaaataatggaaatgatgaag
ctgattcctcactgcagtccccagaattcacctgatgttatagcacgtgttttccacttg
aaactccagcagttagtagatgatattaagaaaaagaattattttgggacatgccttgga
gttatgtacgtggtagagtttcagaaaaggggtttgccacatgtgcacatgctaatatgg
ttggattctgcctccaaacttaatcttcaagcaaatgtggacaagtatgtttcagctgag
atcccggatgaaaaaattgacccagttggtcatgccgctgtaaaagcttttatgatgcac
ggtccatgcggtaaagaatttccaaaatcaccatgcatgaaacaattcaaatgtacaaga
cattttccaaagaagttttgtcaagctaccacatttgatcagtcgggattcccaatatac
aagcgtaggcagaccaatataaccgtgaagaaaggaaaagcagatcttgataatcagtgg
gtcgttccttacaaccgtgatctattggtcaggtatcaatgccatatgaatgttgaaata
tgtgcacatgcccgtagcttgaaatacctgttcaagtactgccttaaaggccatgacaga
gctacagttgaaattagagggaaaaaacaaagaccaaacaatggagatttgttggatcaa
aatgaggatgaaattcagtcgtttttcgatggaaggtacatttgtgcatgtgaagccgct
tatcgtatctttggcttcaatatacactacaggtcgttggcggttgaacgtctctctttt
catttagaaggtcagaagcaatgtactttccgttcaaatgagccattagagaaaattgca
gaaagagagaaggaaagacacactcaattagaagcctactttattctgaattccactgat
acaaatgcaaagaaattcctgtatgatgaaataccccaatattatgtctggaatgatgtg
gatagaatatggacaactaggaaaagagggaagaaaattgggaggttgtcttacacacat
catagtgcaggtgaattatggtatttgcgactactgttgaccaaagtgcgtggagcaacc
tcttttgagcatttaagaacagtgaaagggactatttattcaacttttcacgaagcatgt
aaggaatacggacttcttgatgatgacagtgaatgggatcaggttctacaggaatgttca
gtttctggatttccacaacaaattcgccaattgtttgtacacatcatggtgaactgcaag
gtgtcagatctgaattctttgtggaacaatcactggaaaaacatggttgatgacattttg
ttaaaccagaggagaataacagggaatccacttctaatcctcaacgagaaacaacaacag
ttctatgctctcgcagaaatccataatctactaaagaccattggaaaatcaatcaaggaa
ttcaatcaattgcctcagcctccaaatagttatctcgattgttccgtaaataatttaata
atcgaggaaacaagttacaacattacagacatgaagaaagagtatgaacaactgtttgca
agttgtaacaaggaacagttggaagtgtatcatgctgtcatggaatctgttgagaaaaat
gaaggaggcgtcttctttatttatgggagtggaggatgcggtaagacctacttatggcga
actttgatatctaaactcaggtcagaatgtaaaatcgtgttaccagttgcatcttcaggc
attgcagcaactctcatgcccggaggccgaactgcacattccaggttcaaaattccaatt
gtcctagatgaatattccatgtgttctatttctcatacatcggatattgctgaattgatt
aaaaaaacatcactcataatctgggatgaggcaccgatgcaacatagatattcatttgag
tgcttagatagatcacttagagatattatgaaagcagttgatcctaaacgatttcatatg
ccttttggaggtattacgattgttttgggtggggattttaggcaaatccttcctgttatt
cccttggctggacgtggtgagattgttggagcatctattacaagatccaagctgtggaag
ttggccagtgtttacaaattacaccataacatgcgtttgaacaaggggaacaacagggag
gaaattgaggctttaacccattttgctcaatgggtgttggatattggcgatggtaaagtt
ggtcgaccaacaaacaacaataaggaatatggtgaagatgatattgcagtgcctaaaaag
ttctgcaacttggattcagataattctgtcgatcaaatgattcacaacacatttccaaat
ttctgggagaattatcaagatccggattacttaagtgaaagagctatattaacaccaact
aatcaaacagttggaaatgttaatagcattatcgtggaaaagattcccggtgagatgtca
tcatactatagccttgacactgcagaagattatccaggtacacaaagagaacagttggca
tctttccccccagaatatctaaactccttaaatattcccggtttgcctttgcatgaatta
aagcttaaagtcggtgtcgtagtcatgttgatgcgcaatttgaatcaaacattgggtttg
tgtaatggtacgaggatgatggtcaccaagtgtctccaattctgtgttgaatgtgaagta
atagcagggcaatttaagggaacaaaacattttattccaaggatggagttatgtccaaca
gaaacaaggctaccattcaaattatgtagaaaacaaatgcctctacaagtatgctatgcc
atgaccataaacaaagcacaggggcaatctcttgaaagagttggtttgtttttgccaaaa
ggagtcttcacacatggccagttctatgtagcagtaagtcgtgtaacctcgccacagggt
ctaaaattattcatcgatgacgagaatggaaacagcacatacatcactcaaaatgtagtt
tacaaggaagtgttctacaatttaccagttatttag
DBGET
integrated database retrieval system