Daucus carota (carrot): 108202607
Help
Entry
108202607 CDS
T05350
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108202607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108202607
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
108202607
Transfer RNA biogenesis [BR:
dcr03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108202607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Pox_VLTF3
Motif
Other DBs
NCBI-GeneID:
108202607
NCBI-ProteinID:
XP_017226569
LinkDB
All DBs
Position
9:6986111..7011638
Genome browser
AA seq
1089 aa
AA seq
DB search
MLSLIHSPSLPKKRKKRLEFGRMAILSLSFVTSILKPHKPHLSLLFSFKPTPIFHLQRPP
IRRRFTTAAIATSADTQLSEPTSQTHQNASIPTFQQAIQRLQEYWASVGCAIMQCSNTEV
GAGTMNPLTFLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQ
DLFIQSLSALGIDVNEHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLP
LKPVSVEITYGLERIIMLLQGVDHFKKIQYAHGITYGELFSENEKEMSAYYLEHASVDHI
KKHFDFFEAESRSLLDLGLAIPAYDQLLKTSHAFNTLDSRGFVGVTERARYFGRMRSLAR
QCALLWSETRESLGYPLGTAVESEDLIVQKEVLEAAVKMVQMEPRSFVLEIGTEELPPSD
VAHASQELQSLIVQLLEKQRLSHGKVLVFGTPRRLVVNVESLFPKQDEIEAEIRGPPVAK
AFDNEGRPTKAADGFCRRYSVPLDSLYRRVEGKTEYVYVRVTEPARFAVEVLSENLPGAI
GKISFPKSMRWNSEVIFSRPIRWILALHGEVVIPFTFAGLLSGNLSHGLRNTSSANLRVD
NAESYVKVMQQAGVSVDIEQRKKTILELSNALAKRVDGQIVMQNNLLDEVVNLVEAPVPV
LGEFNESFLVLPKELLIMVMQKHQKYFALTDAHGKLLPYFISVANGTINKKVVQKGNESV
LRARYEDAKFFYELDTGKKFTDFRDQLKGILFHEKLGTMLDKMIRIQGTVSELGLALGID
EDKLNTVRDAASLAMSDLATAVVTEFTALSGIMARHYALRDGYSDEISEALFEITLPRFS
GDILPQTDAGTVLAIADRLDSLVGLFGAGCQPSSTNDPFGIRRISYGLVQVLVENNKNLD
LRQALELVASVQPLKIDDKIIDAVQQFVTRRLEQFLVDKGISPEVVRSILKERANWPCLA
AKSVYKMDSLSRGDLLPKVVEAYSRPTRIVRGKEEILVDAEVDEAAFEAKEEKVLWTTFL
LLRSKIHPGIEVDEFFENSSQLLQPLEDFFEHVFVMVDDEKLRKNRLALLQKIAGLPKGI
VDLSLLPGF
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgctatcacttattcactccccttctctaccaaagaagagaaagaagagattggagttt
ggtcgcatggcgattctatctttatcatttgttacttcaattcttaaaccccataaaccc
catctctctcttctcttctctttcaaacccacccccatttttcatcttcaacgcccccca
atacgacgccgcttcactacagctgccatagccacttctgcagatactcaactttcagaa
cccacttcacaaacccatcaaaatgcttctataccaacttttcagcaggccattcaacgc
ctccaggagtattgggcatcagtgggatgtgctataatgcagtgcagcaacacagaggtt
ggagccgggactatgaatcctctgacatttttaagggttcttggtccagaaccgtggaat
gttgcgtatgtagagcccagtatacgaccagatgatagtcgttatggggagaacccaaat
aggcttcaaagacatactcaattccaggttattttgaagcctgatcctggaaattcgcag
gatttgtttattcaaagcttatcggctctaggtattgatgttaatgaacatgatattcga
ttcgtggaggacaactgggaaagcccggtgcttggcgcctggggattgggctgggagata
tggatggatggtatggagatcacacaatttacttacttccagcaggctggaagtctcccg
ttgaagcctgtatctgttgagataacttatggtcttgaacgcataattatgttacttcag
ggagttgatcatttcaagaaaattcaatatgcacatggaatcacatatggagagcttttc
tcagaaaatgagaaggaaatgagtgcatactatctcgagcacgccagtgtggatcatatt
aaaaagcattttgacttttttgaggcagagtcacgctctttacttgatttaggcctcgca
attcctgcgtatgatcagctgttaaagacctctcatgcttttaataccttggactccaga
ggttttgttggtgtaacagagcgagctcgttattttggccgaatgcgcagtttagcccgc
cagtgtgcattattatggtctgaaacgagagaatctcttgggtatccacttggtactgct
gttgaatctgaagatctaattgttcaaaaagaagttctggaggctgcagttaaaatggtg
caaatggaaccaagatcatttgtccttgaaattggtacagaagaattgccgccaagtgat
gtagctcatgcaagccaggaactacagagtctaatagtccagttactagagaaacagagg
ctgagccatggtaaggtgcttgtgtttggcactccacgtagactggtggtgaatgttgaa
agtctattccctaaacaagatgaaattgaggctgaaattcgtggacctcctgttgcaaaa
gcatttgacaacgagggcagacccacaaaggcggctgatggattttgccgcagatactct
gttcctctagattccttatatagaagggttgaagggaaaacagagtatgtctatgtccgt
gttacagagcctgcacgatttgctgtggaggttttatcagaaaatttgcctggtgcaata
ggaaaaatatcattcccaaaatcaatgcgctggaactccgaggtcatttttagccgacct
attcgttggattttggcccttcacggagaagttgtaattccctttacatttgcgggtctc
ttaagtggaaatctatcgcatggtctccgaaatacatcatcagctaatctaagagtagat
aatgcagagtcttatgtcaaagtaatgcagcaggccggagtttctgttgatattgagcaa
cgaaagaaaacaattttagagctgtccaatgctttggcaaagagagttgatggacaaatt
gtgatgcagaacaacttacttgatgaggttgtcaatctcgttgaggcacccgttccagta
cttggggagttcaatgagtcattcctagtgcttccgaaagaacttttaataatggttatg
cagaagcaccagaaatactttgctttgactgatgctcatggaaaactgttaccatacttt
atatctgttgcaaatggaacaattaataagaaggtagtgcaaaaaggaaatgaatctgta
ctcagagctcgatatgaagatgcaaagttcttttatgagctggacacgggtaaaaagttt
acagacttcagagatcaactgaaaggaattcttttccatgagaagcttggtacgatgttg
gacaagatgataaggatccagggtactgtcagtgaactagggctggcccttggcattgac
gaagataaactaaatacagtcagagacgcggcatcattagctatgtcagatcttgctact
gctgttgttacagaattcactgccctatcaggaataatggcacgccactatgctcttcga
gatggctactcagatgagatttcagaggcactgtttgaaatcacacttccacgattttct
ggagacatacttcctcaaactgatgcagggactgttttagcgattgctgacaggctagat
agccttgttgggctctttggagctggttgccaaccaagctccaccaatgacccatttgga
atacgaagaatctcatatggtttagtccaagtgttggtcgagaacaacaaaaatttggat
ctgcgacaagctttggaactcgtagcttctgtgcagcccctaaaaatagacgacaaaata
attgatgcagtacaacagtttgtgactcgaagacttgagcaattcctggttgataaggga
ataagtccagaagtggttcgctctatccttaaagaacgtgcaaactggccttgccttgct
gcaaagtcagtatataagatggacagtttgtcgaggggtgatcttttgccaaaggtagtt
gaagcatactccagacctacgagaattgttcgtggaaaggaagaaatccttgttgatgca
gaggtggatgaggcagcttttgaggcaaaggaagagaaagttctatggacgactttcctc
ctgttgagaagcaaaattcaccctggtatcgaggtggatgagttttttgagaactcttca
cagctattgcaaccgctagaggatttctttgagcatgtttttgtgatggtggatgacgaa
aaactcagaaaaaacaggcttgcactactacagaaaatagctggtcttcccaaagggata
gtagacttgtcacttctgcctggattttaa
DBGET
integrated database retrieval system