Daucus carota (carrot): 108204906
Help
Entry
108204906 CDS
T05350
Name
(RefSeq) mechanosensitive ion channel protein 10-like isoform X1
KO
K22048
mechanosensitive ion channel protein 4/5/6/7/8/9/10
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108204906
Transporters [BR:
dcr02000
]
Other transporters
Pores ion channels [TC:
1
]
108204906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
DUF961
IlvC
HEPN_Apea
Motif
Other DBs
NCBI-GeneID:
108204906
NCBI-ProteinID:
XP_017230072
LinkDB
All DBs
Position
1:complement(47514585..47519296)
Genome browser
AA seq
789 aa
AA seq
DB search
MNGQLKTQVRGLMAANVGNSKTGEISMLETKRSGDVVVMVSGQEKDVKNSPRQEKDVKNS
PRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKS
RFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAHNSFKDMNRNV
SINTPRTPLMASPGGVIVDEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISC
LTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHG
LKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLL
KVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMAGRADSGSQFSFRSKKIGKKGKEDT
KKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITS
EMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEW
VVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQL
VAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKI
YYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNH
NLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEV
QVVNSDAAR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacagctcaagactcaggttaggggtttaatggctgcaaatgttggtaattcg
aaaactggggaaattagtatgctggagaccaagagaagtggtgatgttgttgttatggtg
tctggacaagaaaaagatgtgaagaactcgcccagacaagaaaaagatgtgaagaactcg
ccacggaggctttcgagcgattcccattttgaaggtgtgaagtttgtgccaatgggaact
ccttcgcctgagaatgctaggtttgctccgagtcccaataggcctcccaaaattccgaca
aaggagagcactgccccgcggaaagcacttgccaggtcagtgtactcaaaacccaagtcg
agatttggagagcagcctatttcagttgagtcatatatgcttgaagaagatagcaatttt
atgcaagattgtttaaaatctagtggtaattcgcctgctagaaatatgtctactcaagcc
tcgcctaatagtagagctgcttcagctcataattcatttaaagatatgaatagaaatgtc
tctattaatactcctaggacgcctttgatggcatctcctgggggtgttatcgtggatgag
gatgaagagatttacaagaaagtgagtaatcggaataagctgaagtataagaaggtgaaa
attaaggttttgatagattggatagtgtttctagtgattttgggaagtttgatttcgtgc
ttgaccattgataaattggaacatacaaggatatggggtttggagttgtggaaatggtct
ttgcttgtaatggtcactttttctggtatgttattcactacttggtttatgcattttgtg
gtattggtgattgagatgaactatttgttcagaaaaaaagtgttgtatttcgttcacggc
ttaaagaagagtgcccaggtctgtctttggtggacattaatacttataacttggctttcg
ttgttcaacaatggggttcatcgatcagctactgcgacaaaggttttggattatattacg
tggactatagtttctgtgctcatctgctcattcttgtggctctttaagacattgcttctt
aaggtgttggcttcttctttccatgtaaccacattctttgatagagttcaagaatcaatc
ttccatcaatatgttctccaggtcctatcagggcctccactgatggcaggaagagcagac
agtggcagtcaatttagtttccgaagtaaaaagataggcaagaaagggaaagaagatacc
aagaaggcagtaattgacataaacaaactgcaccagataaagcaagaaaaagtttctgct
tggacaatgaagatattggtagatgtgatatctaattcagggttgtccaccatttccagt
tctctagatgaaactgattattacggtaacaatgaacagactgataaggagataactagt
gagatggaagcaattgcggctgcctatcacatatacagcaatgttgctcagcctggttcc
atgtacatttatgaattggatctgaggagattcatgcttaaggaggaggttgatcttgtg
tttcctctgatagatgtagctgaaatgggacagatagacaagaaagctttgacggaatgg
gtggtgaaggtttataatggtcgaaaagctctagcacatgcattaaatgacaccaaaaca
gctgtgaagcaattgaatacccttgttactgtgatcttaatcgttatcgtttttgtagtc
tggttactcttggtggaaattgcaacaaccaaagtactcctcttcctttcatcgcagctt
gttgcagcagcctttttatttggaaacacttgcaaaacaatatttgaagctatcatattt
gtatttgtgatgcatccatttgatgtcggtgatcgttgtgtcattgatggtgtacagatg
atagttgaagaaatgaacattttaacaacagtcttcttaagatatgatatggagaagata
tactatccaaattcagtcttggctactaagcccattagcaatttctacagaagcccggat
atgggagattcattggagttctctatttgcttcacaaccccagtggagaagattgggtct
ctaagagagaagatcaagaagtatttagagagaactccccagtactggcatccgaaccac
aatttggtggtgaaggagattgaaaatgtaaacaagataaagatggcactgtttttcaat
cacacaatgaactttcaagaatttggagagaagaaccggcgaagatctgaactggtcata
gaaatgaaaaaaatatttgaagagctgggtatcaaatacaatctacttccgcaggaagtt
caagttgtgaattcagatgcggccagatga
DBGET
integrated database retrieval system