Daucus carota (carrot): 108205279
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Entry
108205279 CDS
T05350
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
Organism
dcr
Daucus carota (carrot)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_5
DUF2002
Motif
Other DBs
NCBI-GeneID:
108205279
NCBI-ProteinID:
XP_017230659
UniProt:
A0A162B5Z3
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Position
1:complement(35814100..35828262)
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AA seq
1176 aa
AA seq
DB search
MAKVPMDVDYIPDESNYLVDSKGLHEIELKKFLKTATQSFFKQHGLISHQLNSYNEFIRD
GIQEVFSSVGEIPVKPLYDSSQYGDGEWRSASVKFGKVTFEQPKFYAGENFPTDDGDCFK
DMLPRHARLQNMTYAARMKVQVNFKVYTEKMARSVGFGNENDQYVEKTVSSENNTEMIMG
KLPVMVKSDLCRMKGVTEGDCDFDHGGYFIINGAEKVFVAQEQSCLKRLWLSCNPSWTAS
YRHTFIRKRVQVKLVDSSKIEHTGGRKVLSVKFLTEMPIWILFFALGVSSDKEVVNLIDA
NAEDGTVVNILRASMREADNQCENFRRRGIALSYIEQQFKTCEFPPEESVQECIDKLLLP
KLVGIKQKARFLAYMVKCLLKAYTGRRKFDCRDDFRNKRLELASELLDRELRVHINHAKR
RMIKVMQRDLDGDRSMNRIEHYLDCSIITNGLSRAFSTGAWSHPYKKAEKISGVVANLSR
TNPLQSISEMRRTRQRVEYTGKIGGARYPHPSHWGKICFVSTPDGENCGLIKNLASTALV
STRVLEPIFDKLLDCGMEELVNDTSTSLHGKNLVFVDGELVGVCQDSASFVAELRSMRRR
KELPNQVEIKRDEKQREVRIFCDAGRVLRPLLIVKNIMRIKSIKKGDYGFQSLLDNGIIE
LIGAEEEEDCRTAWGIEHLRSAYGGDVPMNYTHCELDMSFCLGLSAGLVPFANHNHAKRV
LYQSQKHSHQAIGYSTTNPRIRVDTLTHQLYYPQKPLFRTMLSDCLGRPDCNITPFRPEF
YNSQCAIVAVNVHFGYNQEDSIVMNRASAERGMFRSEHIRSYKADIYNDEAFSKPQKVED
SMKFGKIQSRVGRVECLEEDGFPYIGASLKAGDIIIGKHAESGADQSLKLKHTERGTVQR
VVLSANDEGKNFGIVSLRQVRFPCLGDKFSSMHGQKGVLGFLEAQENFPFTAQGIVPDIV
INPHAFPSRQTPGQLLEAALGKGIALGGNEKYATPYSTPSVEVIADQLHKAGFCRSGSER
VYDGRTGEMIRTLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG
EMERDCLIAHGASANLQERLFLCSDYAQMHICRKCKHTANVIQRTMGGKHKIRGPYCRYC
ESAEDIIKVNVPYGAKLLSQELFSMGISIKFETKLW
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtacctatggatgtggattatattcctgatgagagtaactatcttgtggat
tcgaaaggtctacacgaaattgagctgaagaagtttttgaaaacagcaacccaatccttt
ttcaaacaacatggcttgataagtcatcaactgaactcatataacgagttcataagagac
ggtatccaagaggttttcagctctgttggagagatacctgttaagccattgtatgattca
tctcaatacggtgatggtgaatggagatctgcatcagtaaagtttggaaaggtcaccttt
gaacaaccgaaattctatgcaggcgaaaatttcccaacagatgatggtgattgttttaag
gatatgttgcccagacatgctaggcttcagaatatgacatatgcagctaggatgaaagtc
caggtcaactttaaggtatacaccgaaaagatggccagaagcgttggctttggaaatgaa
aatgatcagtatgttgagaagactgtttctagtgaaaataacacggaaatgattatgggg
aagcttccggttatggtgaaatcagatttgtgccgaatgaaaggagttaccgaaggtgat
tgtgattttgaccatggaggttattttataatcaacggagctgagaaggtctttgttgcc
caggagcaaagctgcttgaagaggctgtggttgtcttgcaatcccagttggactgcctct
tatcgtcatacatttataagaaaaagggtgcaagtaaaactagtggactcttccaaaatt
gaacatactggaggaagaaaagttcttagtgtaaaattcctgactgaaatgccaatctgg
atcttattttttgcacttggtgtttcctctgataaagaggttgtgaacctgattgatgct
aatgctgaagatggtactgttgtcaatatcctaagagcttcaatgcgtgaagctgacaat
caatgcgaaaatttccgtagaaggggaattgctcttagttatatagaacaacaattcaaa
acttgtgaatttccacctgaggagtccgttcaggagtgcattgacaagcttctgttaccc
aagcttgttggtatcaagcaaaaggctcgttttcttgcttatatggtgaagtgtcttcta
aaggcttatactggccgcagaaaatttgattgcagggatgatttcagaaacaaaaggtta
gagctggccagtgagcttttagatcgtgaactgagagttcatatcaatcatgctaaaagg
agaatgatcaaggttatgcaaagagatcttgatggagatcgtagcatgaatcgaattgaa
cactatctagactgctcaatcattacaaatgggctttctagggcattctcaactggagca
tggtcacatccatacaagaaagcggaaaagatttctggtgttgtggctaatctgagccga
actaatccactccaatcaatatctgaaatgagaagaacccgccagcgtgttgaatacaca
gggaaaattggtggtgcaagatatccccacccttcccattgggggaagatatgttttgtc
tctactccagatggagaaaactgtggtttgataaaaaatttagccagcactgcacttgtc
agtacgagagttttggaaccaatttttgacaaattgctagactgtgggatggaagagttg
gtgaatgatacctcgacttcacttcatggaaagaacttagtttttgttgacggagaacta
gttggagtttgtcaagattcagcttcatttgttgcagaattaagaagtatgagacgtaga
aaggaattaccaaaccaggtggaaatcaaaagagatgagaagcagagagaagtacgcata
ttttgtgatgctggaagggttctacggcctcttctaattgtcaaaaatataatgaggatc
aaatcaattaaaaagggagactatggttttcaatcccttttggacaatggcataattgaa
cttatcggagccgaggaggaggaagactgtcgtacggcatggggaatcgagcatctcagg
tcggcatatggaggggatgtacccatgaactacacgcactgcgaacttgacatgtcattt
tgcttaggcttaagcgctggacttgtcccctttgcgaatcataaccatgcaaaaagggtt
ctctaccagtctcagaaacactcccatcaggcaataggttattctactacgaatccgcgc
atcagagttgatactcttacacatcagttgtattatccccagaagcctcttttccggacc
atgctttctgattgtctaggaagacctgattgcaatataacgccatttaggccagaattc
tataatagccaatgtgctattgtcgcagttaatgttcactttggctataaccaagaagat
tcaatagtgatgaatcgtgcttcagcagaacgtggtatgtttcggtcagagcacatcaga
agttacaaagctgatatctataacgatgaagccttttccaagccacagaaagtagaggat
tcgatgaagtttggaaagatccaaagcagagttggacgtgtcgaatgcttagaagaagat
ggtttcccatatatcggtgcaagtctgaaggctggtgatattattattgggaaacatgca
gaatcaggggctgaccagagtctaaaactgaagcatactgaaagagggacggttcagaga
gtagtactctctgctaatgatgaagggaaaaatttcggtatagtatctttgagacaggtt
cgatttccatgtctaggggacaaattctctagcatgcatgggcaaaaaggcgttctcggc
ttcttggaggcgcaggagaattttcctttcactgcacaagggatagttccagatatagtg
ataaacccacatgcatttccttcacgtcagactcctggtcaacttttagaggctgctctg
ggtaaagggattgccctcggaggtaatgaaaaatatgccacgccttattccactccctct
gtggaagtcatagcagaccaactccacaaggctggattttgtagatcgggaagcgagaga
gtgtatgatggtcgtactggtgaaatgatacgtaccctcgtgttcatgggtccaacatgc
taccagcgattaacccatatggctgaagacaaggtcaaattccggaacactggcccagtg
catcctctcacgaggcaaccagttgctgatcgtaaacggtttggtggagttaagtttggc
gagatggaacgtgattgtcttatagcccatggagcatcagccaatctgcaggagcgactc
tttttatgtagtgactacgcacagatgcatatatgtcggaaatgcaagcacacagcaaat
gtcatacaacgcacaatggggggcaaacacaaaatcaggggaccatattgtcgctattgc
gagtctgctgaagacattattaaggtaaatgtaccttatggagcaaagctactatcccaa
gagcttttcagcatgggcatatctatcaagtttgaaaccaagctatggtaa
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