Daucus carota (carrot): 108228151
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Entry
108228151 CDS
T05350
Name
(RefSeq) aspartate--tRNA ligase, chloroplastic/mitochondrial
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108228151
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108228151
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108228151
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108228151
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
108228151
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108228151
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108228151
Prokaryotic type
Other AARSs
108228151
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108228151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
108228151
NCBI-ProteinID:
XP_017259141
LinkDB
All DBs
Position
6:18312408..18322045
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AA seq
660 aa
AA seq
DB search
MSLYLRALPSLSLKLRPFYLKPPLPLFYLNKFFKPISVLPKRSLSNSAAATPDTLIPLPK
QPTEDTLLWVSRTGLCGDLSQNDVGKRVCLCGWVALHRIHGGLSFLNLRDHSGIIQVTTL
PDEFPEAHSIINDLRLEYVISVEGVVRNRPAESMNKKMKTGMIEIAAENVKILNAVKCKL
PFLVTTSDDAKDSYKEEIGLRYRCLTLRRPQMNANIMLRHQVVKFIRRYLEDLHGFVEIE
TPILCRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDL
RADRQPEFTQLDMELAFTPLEDILKLNEDLIRQVFLEIKGVQLPNPFPRLTYDEAMSRYG
SDRPDIRFDLELKDVSDVFVESPFKVFADAVSSGGVIKALCVPSGGKTYSNTALKKGELY
SEAMKSGAKGLPYLKVVSDGEVEGISALVSSMDQSRKQQLLERCNAESGDLILFAVGNHS
SVNKTLDRLRIFVAHQLGLVDNTRHSILWVTDFPMFEWNSLEERFEALHHPFTAPHPEDM
KDLSSARALAYDMVYNGVEIGGGSLRIYKREVQEKVLKIIGISREQAEAKFGYLLEALDM
GAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTMSAQCALTSAPSGVDPQQLKDLLYQA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtacctcagagctttaccatctctttcattaaagcttagacctttttatctc
aaaccccctctccctctattttatctcaacaaattctttaaacccatctctgtgttaccc
aaaagaagcctctcaaattctgctgctgctactccagacactctaatcccacttcctaaa
caacccactgaagatacccttttatgggttagtagaactgggctgtgtggtgatttgtct
cagaatgatgtgggcaaaagggtctgtctttgtggttgggttgctcttcataggattcat
gggggccttagctttcttaatctaagagaccattctggaatcattcaggttacaacgcta
ccagacgagtttcctgaagcacattctataattaatgacctgaggctcgagtatgttatt
agtgtggaaggagttgttcgaaaccggcctgctgagtcaatgaacaagaaaatgaagact
ggcatgattgagattgctgcagagaatgttaagattttgaatgctgtaaaatgtaagttg
ccatttttggttactacatctgatgatgcaaaggattcatataaagaggaaatcggcttg
aggtaccgatgccttacactgcgtcgaccacagatgaatgccaatataatgttgcgacat
caggtggtaaaatttattcgtaggtacctggaggatttacatggttttgtggagattgag
actccaatactgtgtagatctactccagagggtgcacgggactatctggtgccttcaaga
gttcagccaggaactttctatgctttgccccaaagtccacagctctttaagcaaatgctg
atggtttctggttttgataagtattatcaaatagcaagatgtttcagggatgaggatcta
agggctgataggcaacctgaatttacacaacttgacatggaactggctttcactccttta
gaggacattttaaagttgaatgaggatttgattagacaggtttttctagagatcaaaggt
gttcagctaccaaatcctttcccaaggcttacttatgatgaagcaatgagtagatatggt
tctgacaggccagatattcgttttgatcttgaattaaaggatgtctctgatgtgtttgta
gagtcccctttcaaagtgtttgcagatgctgtgtcaagtgggggtgttattaaagcactt
tgtgtgccatccggagggaaaacttattcaaacaccgctcttaagaaaggtgaattatac
agtgaagcaatgaaatctggtgcaaagggtttaccttacctgaaagtcgtgagtgatggg
gaagttgaagggatttctgcccttgtatcaagtatggaccaaagtagaaaacagcagcta
ctagaacgatgtaatgcagaatcaggggatcttatcttgtttgcagtgggcaaccattca
tctgttaataaaaccctggaccgcctgaggatatttgtagcccatcagctgggattggtt
gacaataccaggcattccatcctgtgggtaaccgactttccgatgtttgagtggaacagt
ttagaagaaagatttgaggctttgcatcatccttttactgctcctcaccccgaagatatg
aaggatctttcctcggctcgtgccttagcttatgacatggtctacaatggagttgagatt
ggtggtggaagtttgagaatttataagcgtgaagtccaagaaaaggtcttaaaaataatt
ggcatctcgcgtgaacaggctgaagcaaagtttggctatcttttagaggcattagacatg
ggtgctcctccacatgggggtattgcttttggattagatagattagtgatgctattagct
ggtgcaaactcgatccgcgacgtcatagctttcccaaagacgatgagtgctcagtgtgcc
cttactagtgcgccttctggggttgatcctcagcagctgaaggatcttttatatcaggcc
tag
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