Dendrobium catenatum: 110102516
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Entry
110102516 CDS
T05027
Name
(RefSeq) pre-mRNA-processing protein 40C isoform X1
KO
K12824
transcription elongation regulator 1
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110102516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110102516
Spliceosome [BR:
dct03041
]
Complex A
U1 snRNP components
U1 related factors
110102516
Complex B
110102516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
110102516
NCBI-ProteinID:
XP_020686530
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MSSQVLVAQEAQEVPAPSMQSQTAESPILEAPQGSPPSNPSCIPAAAGGSGSNVAVPVTD
PPNINSGPAEAVTVSPTTSSSAQRATHGIASDSSQDPVRAKFVTSHGYVVPPPSFSYSVF
PRVSSASGIPQQTSSAPALKLTPQMSPAALQPPVPGQSLGNRPSFSYNIVPLPNASSASG
QQFQPPAVNNQRQLLIGNSAPPPPPLATACLQPPVPRQPIRPNASISATVPQNFPPPMQF
PVPPPKGQLSPSTNFSFGGGSQTTTVEASVKILQSSTSASDTVSVDTDITSASTGLDSKL
SHDMRTSSSVGSTISPVSNASSMLPPTGSLINDRLPMVGTFTGNNLPKAPNPVAVQPANP
PGSSSATMRPIQHNQVPAPSTQPSITNPTPQNVPQQIYPHFPLVPAQMPPPHAPWMPPQP
AGLQCPRLPQYPAVLPGPFPFSVRDMPPPSVPSPDVRPPGVSHEVNREEALTSTPESSFP
VSNTGAGSPPSDADFEKEANDIQEDGNSKSEELDAWTVHRTETGVLYYYNTISGESTYER
PLKFKGETEKTALQIIPISWEKLSGTDWSLVTTNDLKKYYYNTVNKVSSWQVPAEVLEMR
KNHVANSSKEENASIPADKGTTPSSLNASALQTGGRDSVTLRTSSGQASASALDLIKKKL
QESATPIVSAPLQTSASPASDLNSTRALDVSAKGQQPLNSKDRVKDANGEGNISDSSSDS
DDDESGPTKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAVPSYSARRAIFEQF
VRTRAEEERKEKKAAQKAAINGFKQLLEEALEDMNHRLDFQTFKRKWGGDPRFEALDRKE
REFLFNEKILLRKKADEEKINAERAASMSSFKSMLKEWQEISTSSRWSKVKDNLRNDPRY
KTVNHEEREALFNEYIAELRAVEHEAERAAKAKKDEQDKLKEREREMRKRKEREEQEMER
IRLKVRRKEAVSSYQALLVETIKDLKASWTDSKPKLEKDPQGRATNPDLNQVDAEKLFRD
HIKDLYERCARDYRVLLAEILTADSAARSSENEKNFLNSWSEAKRVLKPDPRYSKMPRKD
REALWLRYVEDLMRKQKSGADTKEKFNSEGKNRSPADASRRSPRRSHVRR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacaagttttggtagcacaggaggcacaggaggtcccagctccttccatgcag
tcacaaactgctgagtcacctattctagaagctccacaaggttcgccgccttcaaatcct
tcctgcattcctgccgcagctggaggatcaggtagtaatgttgcagttccagttacagac
cctccaaatataaattctggcccagcagaagcagtaaccgtatcccctaccacgagctca
tcagctcaaagggctactcatggtattgcaagtgactcatcacaagatcctgttcgggca
aaatttgttacctcacatggctatgttgtccctccaccttctttttcttacagtgtattt
cctagagtgagctctgcctctgggatcccacaacaaacttcgtctgctcctgctttaaaa
ctaactccacaaatgtctcctgctgctctacaaccgccagtccctgggcagtccttagga
aatagaccgtctttttcatacaacatagttccactacctaatgctagctctgcttctggt
cagcagtttcaaccccccgctgtgaacaatcaaaggcagttgttgattggaaattctgcc
ccacctccaccaccattggctactgcatgtttgcagcctccagtaccccgccaacctatt
cgccctaatgcatccatttctgcaactgtgccacagaattttccaccacccatgcagttt
cctgttccccctcctaagggccagctatcaccttcaacaaacttttcttttggtgggggt
tcccaaacaacgacagtagaggcctctgttaagatcttgcaatccagcacatctgcctct
gacacagtttctgtggatactgacataacttcagcatcaactggtttagattcaaaattg
tctcatgatatgcgtacaagttcatccgtaggctcgacaatttctcctgtttctaatgcg
tcgagcatgttacctccaactggttctttgataaatgatcgtcttccaatggttggaact
tttacaggtaataatctgcctaaagcacctaatcctgttgctgttcagccagcaaacccc
ccggggtcttcatcagcaacaatgagacctattcagcataatcaagttcccgcaccatca
actcagccttccattacaaatccaacaccacaaaatgttcctcaacaaatttatccacat
tttccattagtgcctgcacagatgcctcctcctcatgctccttggatgcctcctcagcct
gctgggttacaatgtcctcggctgccccaatatccagctgtacttcctggtcctttcccc
ttctcagtgagagacatgccaccaccctcggttccttctcctgatgttcggcctcctggt
gtttcccatgaggtgaaccgtgaagaagcgcttacctcaacaccagagtcatcattccct
gtaagtaatactggagcaggatcaccgccctctgatgctgattttgaaaaggaagctaat
gatatccaggaagatggtaacagtaaaagtgaagaattggatgcttggacagtgcataga
actgaaacaggtgttttatactactataacactatttcaggagaatctacttatgaaagg
cctttaaaattcaaaggagagactgagaagactgcgcttcagattattccaatctcgtgg
gaaaaattatctggtactgattggtcattggtcacaacaaatgatttgaagaaatactat
tataacaccgtgaacaaggttagtagctggcaagttcctgcagaagttttggaaatgaga
aaaaatcatgtagcaaactcttcaaaagaggagaatgctagcattcccgcagataaggga
actacgcctagcagtttgaatgcttctgctctgcaaacaggtggtcgtgattctgtgacc
ttgagaacttcaagtggacaagcgtctgcatcagcattggatttgataaagaagaagctg
caggaatctgctaccccaattgtgtcggcacctcttcaaacttcagcttcccctgcatct
gatttaaatagtacaagagctctagatgtttcagctaaggggcagcaacctttaaatagt
aaggacagagttaaagatgctaatggagaaggaaatatttcagattcgtcatctgattca
gatgatgacgaaagtgggccaacaaaggaggagtgcattattcagttcaaggaaatgctt
aaagaaagaggagtggcgccattctcaaagtgggaaaaagaacttccaaagatagtcttc
gatccacgctttaaggcagttccaagttattctgctagacgagcaatctttgaacaattt
gttaggacacgtgctgaagaagagaggaaggagaagaaagctgctcagaaggctgcaatt
aatggtttcaaacagctattggaagaagccttggaggatatgaatcacagactagacttc
caaacattcaaaagaaaatggggaggtgatccacggtttgaagccttggatcgtaaagaa
agagagtttcttttcaatgaaaagatacttctaaggaagaaggctgatgaagaaaagatt
aatgcagaaagagcagcaagtatgagtagcttcaagtcaatgctgaaggagtggcaggaa
atatctacaagtagtcggtggtcaaaggtgaaagataatttgagaaatgatccaagatac
aagactgttaatcatgaagagagggaagctttatttaatgaatatattgctgaacttaga
gcagtggaacacgaggcagagcgtgctgcaaaggctaaaaaggatgagcaggataagcta
aaggaaagagagcgggaaatgcggaaaagaaaagaaagagaggagcaagaaatggaacgg
attaggctgaaagttcgaaggaaggaggctgtcagttcctatcaagccttgttggtagag
acaattaaagatctgaaggcttcctggactgattcgaagcccaagctggagaaggatcct
cagggtcgtgctacaaatcctgatcttaatcaagttgatgcagaaaagcttttccgagat
cacatcaaagacttatatgagcgatgcgctcgtgattaccgagttctattagccgaaatc
cttacagcagattcagctgcccggagttcagaaaatgagaagaactttctcaactcatgg
tcagaagctaaacgggttctaaagcctgatcccagatactcgaagatgccaaggaaagac
agggaagctttatggctaagatatgttgaagatctgatgagaaagcagaagtctggagct
gacacaaaagaaaagtttaattccgaaggaaagaacagaagccctgctgatgcttcgcgg
agatcaccaaggagatctcatgttcggagataa
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integrated database retrieval system
