Dendrobium catenatum: 110105299
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Entry
110105299 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110105299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110105299
03009 Ribosome biogenesis [BR:
dct03009
]
110105299
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110105299
Spliceosome [BR:
dct03041
]
Complex A
U1 snRNP components
U1 related factors
110105299
Complex B
110105299
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Helicases
110105299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110105299
NCBI-ProteinID:
XP_020690402
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MSRYDGRAGDPTSYRDRRSDVGYSDGGLSSYGKSYKSSSVKETEGLADLDGLVPFEKNFY
KESPSVSSMTEADVEEYRRKREITVEGRDVPRPIREFRDIGFPDYVMQEIAKAGFVEPTP
IQAQGWPMAMKGRDLIGIAETGSGKTLAYLLPAIIHVNAQPILALGDGPIVLVLAPTREL
AVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNL
RRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLSRHFLYNAYK
VIIGSADLKANHAIRQHVEIVTESQKYNKLVKLLEDIMDGSRILIFLDTKKGCDQITRQL
RTDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGS
LEDYVHRIGRTGRAGSKGTAYTFFTAANCRFAKDLINILQEAGQKVSPELASMGRGAPPP
PGGFRDRGRGLGGGRSWS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacggccgagccggcgaccccacctcctaccgcgaccggagaagcgat
gtgggctatagtgacggaggcctttctagctatggaaagagctataagtcctccagcgtc
aaggagactgaaggattggcggatttggatggcttggtgccgttcgagaagaacttctat
aaagagtctccttcagtgtcttcgatgaccgaggctgacgtggaggagtatcgtcgtaag
cgggagattacggtggagggccgggatgttccgaggcccattagggaattccgtgatatt
ggttttcctgattatgttatgcaagaaattgctaaagctgggtttgttgaacctacaccc
attcaagcacaaggatggccaatggccatgaagggtcgtgaccttattggtattgctgaa
acaggatcgggaaagacattggcttatctattgcctgccattattcatgtgaatgctcaa
ccaattttagcacttggtgatggtccaattgtcttggtcttggctcccactcgtgaactt
gctgttcagatacaacaagaggcaactaaatttggagcatcatcaaagataaaaaatact
tgcatatatggtggtgttcccaagggccctcaggttcgagatctccaaaaaggtgttgaa
attgtaattgccacacctggccggttgattgatatgttagagtcacatcatactaactta
cggagggtgacataccttgtgctggatgaggcagatcgtatgttggatatgggatttgaa
ccacagatcaggaagattgtctctcagatccgccctgaccgtcaaactctttattggagt
gccacttggcccaaagaagttgaacaactttctagacattttctttacaatgcatacaag
gtgattatcggttccgccgacttgaaagctaatcatgcaattcgccagcatgtagagatt
gtaacagagagtcagaaatataacaaattagtcaagttactggaggatattatggacgga
agtcggatattgatattcctcgacaccaaaaagggttgtgatcaaataacaagacagcta
cgtacagatggttggcctgctctttcaatccatggagataagagtcaagcagagagagat
tgggtgctctcagagtttaaagctgggaaaagccccataatgactgctactgatgttgct
gctcgtggtttggatgtgaaggatgtgaagtacgtaataaactatgattttcctggatct
ttagaggattatgtgcatcgtatagggagaacaggcagagctggatctaaaggaactgcg
tacacttttttcacagcagccaattgcagatttgcaaaagatctcattaacatactccaa
gaggctggacagaaggtcagccctgaactggcttccatgggtcgaggtgcccctccccca
cctggaggttttcgcgatagaggaagagggttgggcggaggtcgttcatggagctaa
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