Dendrobium catenatum: 110115495
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Entry
110115495 CDS
T05027
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dct03016
]
110115495
Enzymes [BR:
dct01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
110115495
Transfer RNA biogenesis [BR:
dct03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110115495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
PAC4
Motif
Other DBs
NCBI-GeneID:
110115495
NCBI-ProteinID:
XP_020704408
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MISISTRSLGARFALVALLFSSSVFCLWKSHWLRRRRRLSTLSFASPNPKPNLTAKIFFA
SQTGTSESLARRLAARLSAHGLAANLVDPRHYEPEDLPKETFVLFVVSSWEDGKPPPNAA
FLAQWLAESAADFRVGSLILSSCQFAVFGVGSRSYGSTFNAAARDFARWMKELGAAEMMP
LWDGDVDGGEVDREFDLWSEGIMKLMKGEMSLGDVAERDEVDVLEEDVEYDDEEEDVEGA
EDDVVDLEDIAGKAPSRKMKAELVNGNGVIKEMVTPIIRNNLEKQGYKIIGSHSGVKICR
WTKAQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKEWRWKMDDP
LVIVDAAIDQHTKMIKQMKGVPGVKEQQFLEGLSPRHCALSLVGEPIMYPEINRLIEELH
RRHISTFLVTNAQFPDRIKMLKPITQLYVSVDAATKESLKAVDRPLFGDFWERFVDSLKA
LHDKQQRTVYRLTLVKGWNAEEVDAYANLLGLGEPDFIEIKGVTYCGSTATSKLTMENVP
WHSDVKEFSETLAIKSNGLYEVACEHVHSCCVLLAKVDKFKINGQWHTWIDYERFHDLVA
SGKPFGTEDYMAVTPSWAVYGAEEGGFDPKQFRYKKERRHGPAALKNEKLLGAERAPSTQ
ALVI
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcatctccactcgctctctcggagcccgattcgctctcgtggcccttctcttc
tcctcctctgtcttctgcctctggaaatcccactggctccgtcgccgccgtcgcctgtcc
accctttcgttcgcaagccctaaccctaaacctaacttaaccgcaaaaatcttcttcgcc
tcgcaaaccggcacttcggagtcccttgctcgcaggctcgccgcccgcctctctgcccac
ggtcttgcggccaaccttgttgacccccgacattacgagccagaagacctgcccaaggaa
acgttcgtgctctttgtagtctcctcctgggaagacggtaaaccgccgcccaacgccgcc
ttcctcgcccaatggcttgccgagagtgccgccgacttccgtgttggatcgctgatactc
tccagttgccagttcgcagtcttcggggtcggttctcgatcgtatggctcgaccttcaat
gctgccgcgcgggactttgcgcggtggatgaaggagcttggtgctgcggagatgatgccg
ctgtgggatggggatgtggacggaggggaggttgacagggaattcgatctgtggagtgag
ggaatcatgaagttgatgaagggtgaaatgagcttgggtgatgtagcggagagagatgaa
gttgatgtgttggaagaggatgtggagtatgatgatgaggaagaggatgttgagggtgcg
gaggatgatgttgttgatttggaggatattgctggaaaagcgccgtcgagaaaaatgaag
gcggagctggtgaatggaaacggtgtgatcaaggaaatggttacaccaattattagaaat
aacttggagaaacagggatacaagattattggttcacatagtggtgttaaaatttgtaga
tggacaaaggcacaactccgaggacgtgggggctgctacaagcactcattttatgggatt
gagagtcataggtgcatggaagcaaccccaagcttagcatgtgcaaataagtgtgttttt
tgttggaggcatcatactaatcctgtgggaaaagaatggcggtggaagatggatgatcct
cttgttattgtggatgctgccatcgaccagcatactaaaatgataaagcaaatgaagggt
gtcccaggggtgaaggaacagcagtttcttgaaggtctatctccccgacactgtgctttg
tctcttgtcggtgaaccaatcatgtatccggagataaatagactaatcgaggaactgcac
cgcaggcacatttctacttttcttgttacaaatgcccaatttccagacagaataaagatg
ttaaaacctattacccagttatatgtgagtgttgatgcagcaacaaaggagagcttgaag
gcagttgatagaccactttttggagacttttgggagcgctttgttgattctctgaaagct
ttgcatgacaaacaacagaggacggtttaccgtctaactcttgttaaaggatggaatgca
gaagaagtagacgcatatgctaacttgctaggccttggagaaccagatttcattgagatc
aagggtgtcacgtactgtggctcaactgccacatcaaagttgacaatggagaatgttccc
tggcattctgatgttaaagagttctctgaaactttggccatcaaaagcaatggcctgtat
gaagtagcttgtgagcatgtccattcttgctgtgttcttctggcaaaagttgacaagttc
aaaatcaatggccagtggcacacttggatagactatgaaaggtttcatgatctagtggct
tcaggaaagccctttggaactgaagactacatggctgtcacaccatcttgggctgtctat
ggtgcagaggaaggtggatttgatccaaaacagttccgctacaaaaaggagcgtcgccat
ggacctgcagcccttaaaaacgaaaaattattaggtgcggagcgtgcaccgtccacacaa
gcactagttatttag
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