Dickeya dadantii 3937: Dda3937_02587
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Entry
Dda3937_02587 CDS
T01305
Name
(GenBank) Fe(2+)/alpha-ketoglutarate-dependent dioxygenase lpxO
KO
K12979
beta-hydroxylase [EC:1.14.11.-]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Dda3937_02587
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ddd01005
]
Dda3937_02587
Lipopolysaccharide biosynthesis proteins [BR:
ddd01005
]
Lipid A
Dda3937_02587
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Gene cluster
GFIT
Motif
Pfam:
Asp_Arg_Hydrox
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ADM99903
UniProt:
E0SEG9
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All DBs
Position
complement(3953805..3954839)
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AA seq
344 aa
AA seq
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MRVFLQRAVILHRVRCPISGIMPDSRPVSYIRAGWAHCSQGSHCMKYVILMVFILAVAYV
HFRGRVRYKFWRQLSDHSTFTAPLNGFMYLFSRVPVTPYLKPGHFPELAVLQENWQMIRE
EGETLLTMQEIKASDRYNDAGFNSFFKTGWKRFYLKWYEDAHPSAGVMCPNTTALLRSLP
SVKAAMFATLPDGSRLPRHRDPYAGSLRYHLGLKTPNDDRCFIEVDGERYSWRDGEGVLF
DETYIHYAENTSGQNRLILFCDIERPMRYRWAQAVNHWVGRNLMSAAAAPNTEADRTGGI
NRIFRYVYAIRKVGKRLKSWNKPVYYLAKWSLFGGIAALIWLAL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgtttcttcaacgagccgtcatcctgcaccgggtgcgatgcccgatatcggga
ataatgccggacagcaggccggtttcttatatacgggcaggatgggctcattgctctcag
ggaagtcactgcatgaaatatgtcattctgatggtgtttattctggcggtcgcctatgtc
cactttcgtggtcgcgtacgctataaattctggcgccaactgtcggaccactcgaccttt
accgcgccgctcaacggttttatgtacttgttttcccgcgtcccggtgacgccgtatctc
aagcccggccatttccctgaactggctgtgttgcaggagaactggcagatgatccgggaa
gagggggaaacgctgctgacgatgcaggaaatcaaagcgtcggatcgctataacgacgcc
ggtttcaactcgttcttcaagaccggctggaagcgcttctacctgaaatggtatgaggat
gctcatccctccgcgggtgtgatgtgccccaataccacggcgttgctgcgttcgctgccg
tcggtaaaagcggcgatgttcgctaccctgccggatggcagccgtttgccgcgccaccgc
gacccttacgccggttcgctgcgttaccatctgggtctgaagacgcccaacgacgatcgc
tgctttatcgaggtcgacggcgaacgctacagctggcgggatggcgaaggcgtgctgttt
gacgaaacctatatccactatgcggaaaacaccagcggccagaaccgcctgatcctgttt
tgcgatatcgaacggccgatgcgctatcgctgggcgcaggcggtgaatcactgggtgggg
cgcaatctgatgagcgcggcggcggcaccgaataccgaggcggatcgcaccggcggaatc
aaccggatcttccgctatgtctatgcgatcagaaaagtgggcaagcggctaaaaagctgg
aataagccggtttactatctggcgaagtggtcgttgttcggcggtatcgccgcgctgatc
tggctggcgttatag
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